Ighv6-1 Pseudogene Detail

Summary

• Symbol
  Ighv6-1
• Name
  immunoglobulin heavy variable 6-1

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009888
  NCBI Gene: 777689
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:113567080-113567548 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009888	pseudogenic gene segment	Chr12:113567080-113567548 (-)
129S1/SvImJ	ENSMUSG00200030009	pseudogenic gene segment	Chr12:105370435-105370903 (-)
A/J	ENSMUSG00195048797	pseudogenic gene segment	Chr12:107875573-107876042 (-)
AKR/J	ENSMUSG00220039775	pseudogenic gene segment	Chr12:105860167-105860647 (-)
BALB/cJ	ENSMUSG00180051165	pseudogenic gene segment	Chr12:107139053-107139521 (-)
C3H/HeJ	ENSMUSG00175050205	pseudogenic gene segment	Chr12:109757591-109758066 (-)
C57BL/6NJ	ENSMUSG00215050219	pseudogenic gene segment	Chr12:106391223-106391691 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000096	pseudogenic gene segment	Chr12:108278148-108278449 (-)
CAST/EiJ	ENSTCUG00005043761	pseudogenic gene segment	Chr12:106052264-106052950 (-)
CBA/J	ENSMUSG00210040908	pseudogenic gene segment	Chr12:106775464-106775484 (-)
DBA/2J	ENSMUSG00185030890	pseudogenic gene segment	Chr12:108601179-108601647 (-)
FVB/NJ	ENSMUSG00205047354	pseudogenic gene segment	Chr12:105849392-105849867 (-)
JF1/MsJ	ENSUMUG00000034366	pseudogenic gene segment	Chr12:113407229-113407705 (-)
LP/J	ENSMUSG00230048276	pseudogenic gene segment	Chr12:115619206-115619674 (-)
NOD/ShiLtJ	ENSMUSG00190027921	pseudogenic gene segment	Chr12:105202301-105202769 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005041766	pseudogenic gene segment	Chr12:106117693-106118168 (-)

Homology

• Gene Tree
  Ighv6-1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000103111 (Evidence)
• NCBI Gene
  777689

Representative Sequences			Length	Strain/Species
genomic	777689	NCBI Gene Model | MGI Sequence Detail	469	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;