Igkv13-57-2 Pseudogene Detail

Summary

• Symbol
  Igkv13-57-2
• Name
  immunoglobulin kappa variable 13-57-2

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009885
  NCBI Gene: 724106
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:69500723-69501000 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 31.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009885	pseudogenic gene segment	Chr6:69500538-69501000 (+)
129S1/SvImJ	ENSMUSG00200014116	pseudogenic gene segment	Chr6:66407046-66407508 (+)
A/J	ENSMUSG00195044391	pseudogenic gene segment	Chr6:66159962-66160424 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180038985	pseudogenic gene segment	Chr6:66515835-66516297 (+)
C3H/HeJ	ENSMUSG00175013624	pseudogenic gene segment	Chr6:110934010-110934472 (-)
C57BL/6NJ	ENSMUSG00215043765	pseudogenic gene segment	Chr6:66490382-66490844 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000117	pseudogenic gene segment	Chr6:66687325-66687786 (+)
CAST/EiJ	ENSTCUG00005037161	pseudogenic gene segment	Chr6:66790920-66791332 (+)
CBA/J	ENSMUSG00210047201	pseudogenic gene segment	Chr6:66313206-66313668 (+)
DBA/2J	ENSMUSG00185044812	pseudogenic gene segment	Chr6:66878420-66878882 (+)
FVB/NJ	ENSMUSG00205042488	pseudogenic gene segment	Chr6:65856856-65857318 (+)
JF1/MsJ	ENSUMUG00000043667	pseudogenic gene segment	Chr6:66005155-66005449 (+)
LP/J	ENSMUSG00230029905	pseudogenic gene segment	Chr6:67998732-67999194 (+)
NOD/ShiLtJ	ENSMUSG00190046744	pseudogenic gene segment	Chr6:65945931-65946225 (+)
NZO/HlLtJ	ENSMUSG00225021013	pseudogenic gene segment	Chr6:69972601-69973063 (+)
PWK/PhJ	ENSLUMG00010022276	pseudogenic gene segment	Chr6:65343750-65344212 (+)
SPRET/EiJ	ENSMSPG00010028648	pseudogenic gene segment	Chr6:67428199-67428255 (+)
WSB/EiJ	ENSIUOG00005026740	pseudogenic gene segment	Chr6:66883380-66883842 (+)

Homology

• Gene Tree
  Igkv13-57-2
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104551 (Evidence)
• NCBI Gene
  724106

Representative Sequences			Length	Strain/Species
genomic	724106	NCBI Gene Model | MGI Sequence Detail	278	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;