Zscan4-ps4 Pseudogene Detail

Summary

• Symbol
  Zscan4-ps4
• Name
  zinc finger and SCAN domain containing 4, pseudogene 4
• Synonyms
  Gm17737

• Feature Type
  pseudogene
• IDs
  MGI:5009814
  NCBI Gene: 232867
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:11713603-11717839 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 7.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  225 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009814	pseudogene	Chr7:11713518-11717898 (-)
129S1/SvImJ	ENSMUSG00200041964	pseudogene	Chr7:5778773-5782999 (-)
A/J	ENSMUSG00195053117	pseudogene	Chr7:5465715-5469944 (-)
AKR/J	ENSMUSG00220029973	pseudogene	Chr7:4946508-4950742 (-)
BALB/cJ	ENSMUSG00180051496	pseudogene	Chr7:5424525-5428754 (-)
C3H/HeJ	ENSMUSG00175049087	pseudogene	Chr7:5758544-5762770 (-)
C57BL/6NJ	ENSMUSG00215044574	pseudogene	Chr7:6089898-6094135 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028454	pseudogene	Chr7:5548548-5552790 (-)
CBA/J	ENSMUSG00210049074	pseudogene	Chr7:5054054-5058280 (-)
DBA/2J	ENSMUSG00185046369	pseudogene	Chr7:8586873-8591099 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000052195	pseudogene	Chr7:8236358-8240602 (-)
LP/J	ENSMUSG00230048349	pseudogene	Chr7:12769204-12773430 (-)
NOD/ShiLtJ	ENSMUSG00190050469	pseudogene	Chr7:5662335-5666570 (-)
NZO/HlLtJ	ENSMUSG00225054701	pseudogene	Chr7:10249062-10253292 (-)
PWK/PhJ	ENSLUMG00010050752	pseudogene	Chr7:9353792-9358025 (-)
SPRET/EiJ	ENSMSPG00010048565	pseudogene	Chr7:5546248-5550802 (-)
WSB/EiJ	ENSIUOG00005053196	pseudogene	Chr7:5670298-5674529 (-)

Homology

• Gene Tree
  Zscan4-ps4
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000109860 (Evidence)
• NCBI Gene
  232867

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109860	Ensembl Gene Model | MGI Sequence Detail	4237	C57BL/6J
transcript	ENSMUST00000210183	Ensembl | MGI Sequence Detail	1147	Not Applicable

Other
Accession IDs

MGI:6831642

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;