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Mir3968 Gene Detail
Summary
  • Symbol
    Mir3968
  • Name
    microRNA 3968
  • Synonyms
    mmu-mir-3968
Location &
Maps
more
  • Sequence Map
    Chr11:115338787-115338886 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.84 cM
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4950407
 miRNA gene Chr11:115338787-115338886 (-)
129S1/SvImJ ENSMUSG00200052263
 miRNA gene Chr11:112709508-112709607 (-)
A/J ENSMUSG00195033537
 miRNA gene Chr11:112411230-112411329 (-)
AKR/J ENSMUSG00220033441
 miRNA gene Chr11:112512657-112512756 (-)
BALB/cJ ENSMUSG00180052425
 miRNA gene Chr11:112711065-112711164 (-)
C3H/HeJ ENSMUSG00175045595
 miRNA gene Chr11:112663124-112663223 (-)
C57BL/6NJ ENSMUSG00215046328
 miRNA gene Chr11:112198663-112198762 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007182
 miRNA gene Chr11:111295150-111295249 (-)
CAST/EiJ ENSTCUG00005041544
 miRNA gene Chr11:112068263-112068362 (-)
CBA/J ENSMUSG00210050860
 miRNA gene Chr11:112383124-112383223 (-)
DBA/2J ENSMUSG00185026659
 miRNA gene Chr11:112702682-112702781 (-)
FVB/NJ ENSMUSG00205047410
 miRNA gene Chr11:112502222-112502321 (-)
JF1/MsJ ENSUMUG00000054147
 miRNA gene Chr11:112970926-112971025 (-)
LP/J ENSMUSG00230050948
 miRNA gene Chr11:113756500-113756599 (-)
NOD/ShiLtJ ENSMUSG00190049929
 miRNA gene Chr11:112734021-112734120 (-)
NZO/HlLtJ ENSMUSG00225053763
 miRNA gene Chr11:115812154-115812253 (-)
PWK/PhJ ENSLUMG00010025263
 miRNA gene Chr11:112486271-112486370 (-)
SPRET/EiJ ENSMSPG00010044090
 miRNA gene Chr11:112997326-112997425 (-)
WSB/EiJ ENSIUOG00005048305
 miRNA gene Chr11:112472480-112472579 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100628623 NCBI Gene Model | MGI Sequence Detail 100 C57BL/6J ±  kb
transcript NR_039549 RefSeq | MGI Sequence Detail 100 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0016977
References
more
  • Summaries
    All 7
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:200238 Polikepahad S, et al., Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2. Nucleic Acids Res. 2013 Jan;41(2):1164-77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory