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Lgals1-ps2 Pseudogene Detail
Summary
  • Symbol
    Lgals1-ps2
  • Name
    lectin, galactose binding, soluble 1, pseudogene 2
  • Synonyms
    Gm17209
Location &
Maps
more
  • Sequence Map
    Chr15:79139774-79140292 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 37.70 cM
Strain
Comparison
more
  • SNPs within 2kb
    49 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4938036
 pseudogene Chr15:79139768-79140295 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0039669
 pseudogene Chr15:76771650-76772166 (+)
AKR/J MGP_AKRJ_G0039595
 pseudogene Chr15:78904073-78904589 (+)
BALB/cJ MGP_BALBcJ_G0039643
 pseudogene Chr15:76760841-76761357 (+)
C3H/HeJ MGP_C3HHeJ_G0039305
 pseudogene Chr15:78897323-78897839 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040197
 pseudogene Chr15:82632546-82633064 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036840
 pseudogene Chr15:73253475-73253992 (+)
CAST/EiJ MGP_CASTEiJ_G0038426
 pseudogene Chr15:79601411-79601923 (+)
CBA/J MGP_CBAJ_G0039274
 pseudogene Chr15:85189610-85190126 (+)
DBA/2J MGP_DBA2J_G0039466
 pseudogene Chr15:76249857-76250373 (+)
FVB/NJ MGP_FVBNJ_G0039423
 pseudogene Chr15:75283098-75283614 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0039427
 pseudogene Chr15:90337312-90337832 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040302
 pseudogene Chr15:78920560-78921883 (+)
PWK/PhJ MGP_PWKPhJ_G0038100
 pseudogene Chr15:76260802-76261322 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037850
 pseudogene Chr15:78730158-78730676 (+)
WSB/EiJ MGP_WSBEiJ_G0038658
 pseudogene Chr15:79305789-79306307 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Lgals1-ps2
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091135 Ensembl Gene Model | MGI Sequence Detail 519 C57BL/6J ±  kb
transcript ENSMUST00000170221 Ensembl | MGI Sequence Detail 519 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 25
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory