Gm17197 Gene Detail

Summary

• Symbol
  Gm17197
• Name
  predicted gene 17197

• Feature Type
  lncRNA gene
• IDs
  MGI:4938024
  NCBI Gene: 102634685
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:56345208-56354685 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 51.82 cM

Strain
Comparison

• SNPs within 2kb
  468 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4938024	lncRNA gene	Chr19:56345117-56354810 (+)
129S1/SvImJ	ENSMUSG00200015372	lncRNA gene	Chr19:53052948-53054926 (+)
A/J	ENSMUSG00195002567	lncRNA gene	Chr19:53229736-53231715 (+)
AKR/J	ENSMUSG00220018337	lncRNA gene	Chr19:52979975-52981953 (+)
BALB/cJ	ENSMUSG00180020379	lncRNA gene	Chr19:53468848-53470827 (+)
C3H/HeJ	ENSMUSG00175022546	lncRNA gene	Chr19:53002889-53004869 (+)
C57BL/6NJ	ENSMUSG00215025813	lncRNA gene	Chr19:53088886-53090865 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003105	antisense lncRNA gene	Chr19:52832239-52834205 (+)
CAST/EiJ	ENSTCUG00005015586	lncRNA gene	Chr19:52630946-52633088 (+)
CBA/J	ENSMUSG00210021232	lncRNA gene	Chr19:53082221-53084201 (+)
DBA/2J	ENSMUSG00185028812	lncRNA gene	Chr19:53581052-53583032 (+)
FVB/NJ	ENSMUSG00205003603	lncRNA gene	Chr19:52464572-52466551 (+)
JF1/MsJ	ENSUMUG00000038994	lncRNA gene	Chr19:53759761-53761941 (+)
LP/J	ENSMUSG00230027965	lncRNA gene	Chr19:54334420-54336398 (+)
NOD/ShiLtJ	ENSMUSG00190013694	lncRNA gene	Chr19:52955835-52957813 (+)
NZO/HlLtJ	ENSMUSG00225025477	lncRNA gene	Chr19:57940106-57942084 (+)
PWK/PhJ	ENSLUMG00010019163	lncRNA gene	Chr19:52817171-52819345 (+)
SPRET/EiJ	ENSMSPG00010003580	lncRNA gene	Chr19:52678409-52680396 (+)
WSB/EiJ	ENSIUOG00005025194	lncRNA gene	Chr19:52440016-52441994 (+)

Homology

• Gene Tree
  Gm17197
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  2

• Ensembl
  ENSMUSG00000090990 (Evidence)
• NCBI Gene
  102634685

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090990	Ensembl Gene Model | MGI Sequence Detail	9478	C57BL/6J
transcript	ENSMUST00000332493	Ensembl | MGI Sequence Detail	1037	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm17197:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157179	Chr19:56351253-56351256 (+)	6,047 bp