Gm17163 Gene Detail

Summary

• Symbol
  Gm17163
• Name
  predicted gene 17163

• Feature Type
  lncRNA gene
• IDs
  MGI:4937990
  NCBI Gene: 102638734
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:121649355-121660259 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 72.65 cM

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937990	lncRNA gene	Chr9:121649355-121660259 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004710	antisense lncRNA gene	Chr9:124785104-124796078 (+)
A/J	MGP_AJ_G0004690	antisense lncRNA gene	Chr9:120026669-120037497 (+)
AKR/J	MGP_AKRJ_G0004673	antisense lncRNA gene	Chr9:123228667-123239585 (+)
BALB/cJ	MGP_BALBcJ_G0004674	antisense lncRNA gene	Chr9:119937652-119948570 (+)
C3H/HeJ	MGP_C3HHeJ_G0004622	antisense lncRNA gene	Chr9:123689258-123700176 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004823	antisense lncRNA gene	Chr9:128197985-128208889 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004264	antisense lncRNA gene	Chr9:117189217-117200082 (+)
CAST/EiJ	MGP_CASTEiJ_G0004579	antisense lncRNA gene	Chr9:123728609-123739206 (+)
CBA/J	MGP_CBAJ_G0004617	antisense lncRNA gene	Chr9:132885924-132896842 (+)
DBA/2J	MGP_DBA2J_G0004632	antisense lncRNA gene	Chr9:119470138-119481056 (+)
FVB/NJ	MGP_FVBNJ_G0004650	antisense lncRNA gene	Chr9:118390911-118402022 (+)
LP/J	MGP_LPJ_G0004714	antisense lncRNA gene	Chr9:125122030-125132936 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004636	antisense lncRNA gene	Chr9:133827685-133838589 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004823	antisense lncRNA gene	Chr9:123669096-123680558 (+)
PWK/PhJ	MGP_PWKPhJ_G0004531	antisense lncRNA gene	Chr9:119930390-119941298 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004468	antisense lncRNA gene	Chr9:123787290-123806024 (+)
WSB/EiJ	MGP_WSBEiJ_G0004622	antisense lncRNA gene	Chr9:123518490-123529470 (+)

Homology

• Gene Tree
  Gm17163
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000092042 (Evidence)
• NCBI Gene
  102638734

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092042	Ensembl Gene Model | MGI Sequence Detail	10905	C57BL/6J
transcript	ENSMUST00000152043	Ensembl | MGI Sequence Detail	432	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;