Gm17149 Pseudogene Detail

Summary

• Symbol
  Gm17149
• Name
  predicted gene 17149

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:4937976
  NCBI Gene: 108167565
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:18706631-18707005 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 10.30 cM

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937976	pseudogene	Chr8:18705996-18717611 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014047	pseudogene	Chr8:16119324-16119698 (-)
A/J	MGP_AJ_G0014062	pseudogene	Chr8:15565581-15565955 (-)
AKR/J	MGP_AKRJ_G0013997	pseudogene	Chr8:16016210-16016584 (-)
BALB/cJ	MGP_BALBcJ_G0014019	pseudogene	Chr8:15674616-15674990 (-)
C3H/HeJ	MGP_C3HHeJ_G0013852	pseudogene	Chr8:16214971-16215345 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014453	pseudogene	Chr8:16657385-16657759 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013511	pseudogene	Chr8:16064009-16064383 (-)
CBA/J	MGP_CBAJ_G0013834	pseudogene	Chr8:17368303-17368677 (-)
DBA/2J	MGP_DBA2J_G0013912	pseudogene	Chr8:15523734-15524108 (-)
FVB/NJ	MGP_FVBNJ_G0013911	pseudogene	Chr8:15531307-15531681 (-)
LP/J	MGP_LPJ_G0013995	pseudogene	Chr8:16140980-16141354 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013938	pseudogene	Chr8:17538346-17538720 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014426	pseudogene	Chr8:16043579-16043953 (-)
PWK/PhJ	MGP_PWKPhJ_G0013326	pseudogene	Chr8:15541087-15541525 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013099	pseudogene	Chr8:15957757-15958125 (-)
WSB/EiJ	MGP_WSBEiJ_G0013573	pseudogene	Chr8:16127366-16127740 (-)

Homology

• Gene Tree
  Gm17149
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000090334 (Evidence)
• NCBI Gene
  108167565

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090334	Ensembl Gene Model | MGI Sequence Detail	375	C57BL/6J
transcript	ENSMUST00000164712	Ensembl | MGI Sequence Detail	375	Not Applicable
polypeptide	XP_036010298	RefSeq | MGI Sequence Detail	137	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;