Gm17108 Gene Detail

Summary

• Symbol
  Gm17108
• Name
  predicted gene 17108

• Feature Type
  lncRNA gene
• IDs
  MGI:4937935
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:69758617-69763020 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 35.55 cM

Strain
Comparison

• SNPs within 2kb
  257 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937935	lncRNA gene	Chr13:69758617-69763020 (-)
129S1/SvImJ	ENSMUSG00200014031	lncRNA gene	Chr13:64121383-64125786 (-)
A/J	ENSMUSG00195030764	lncRNA gene	Chr13:64742477-64746880 (-)
AKR/J	ENSMUSG00220038183	lncRNA gene	Chr13:63317686-63322090 (-)
BALB/cJ	ENSMUSG00180029353	lncRNA gene	Chr13:65227496-65231899 (-)
C3H/HeJ	ENSMUSG00175009008	lncRNA gene	Chr13:65528602-65533005 (-)
C57BL/6NJ	ENSMUSG00215019237	lncRNA gene	Chr13:65285204-65289607 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013393	unclassified non-coding RNA gene	Chr13:64353140-64357564 (-)
CAST/EiJ	ENSTCUG00005012157	lncRNA gene	Chr13:64865477-64869894 (-)
CBA/J	ENSMUSG00210009445	lncRNA gene	Chr13:64851461-64855864 (-)
DBA/2J	ENSMUSG00185008956	lncRNA gene	Chr13:68547734-68552137 (-)
FVB/NJ	ENSMUSG00205027718	lncRNA gene	Chr13:64226522-64230925 (-)
JF1/MsJ	ENSUMUG00000034188	lncRNA gene	Chr13:68280735-68285138 (-)
LP/J	ENSMUSG00230035214	lncRNA gene	Chr13:78474890-78479293 (-)
NOD/ShiLtJ	ENSMUSG00190042950	lncRNA gene	Chr13:64854797-64859200 (-)
NZO/HlLtJ	ENSMUSG00225048243	lncRNA gene	Chr13:70956289-70960692 (-)
PWK/PhJ	ENSLUMG00010012349	lncRNA gene	Chr13:64334676-64339080 (-)
SPRET/EiJ	ENSMSPG00010030930	lncRNA gene	Chr13:65241642-65246081 (-)
WSB/EiJ	ENSIUOG00005025213	lncRNA gene	Chr13:63744603-63749008 (-)

Homology

• Gene Tree
  Gm17108
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17108
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000091133 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091133	Ensembl Gene Model | MGI Sequence Detail	4404	C57BL/6J
transcript	ENSMUST00000168625	Ensembl | MGI Sequence Detail	2877	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69