Gm17080 Gene Detail

Summary

• Symbol
  Gm17080
• Name
  predicted gene 17080

• Feature Type
  lncRNA gene
• IDs
  MGI:4937907
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:45897046-45899303 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 22.59 cM

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937907	lncRNA gene	Chr17:45897046-45899303 (+)
129S1/SvImJ	ENSMUSG00200028699	lncRNA gene	Chr17:41105004-41107258 (+)
A/J	ENSMUSG00195022925	lncRNA gene	Chr17:42604987-42607245 (+)
AKR/J	ENSMUSG00220037028	lncRNA gene	Chr17:41576607-41578858 (+)
BALB/cJ	ENSMUSG00180025668	lncRNA gene	Chr17:42343137-42345389 (+)
C3H/HeJ	ENSMUSG00175016404	lncRNA gene	Chr17:41657160-41659411 (+)
C57BL/6NJ	ENSMUSG00215036748	lncRNA gene	Chr17:41219235-41221493 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003031	antisense lncRNA gene	Chr17:42287671-42289944 (+)
CAST/EiJ	ENSTCUG00005025644	lncRNA gene	Chr17:42400425-42402679 (+)
CBA/J	ENSMUSG00210040371	lncRNA gene	Chr17:41406873-41409124 (+)
DBA/2J	ENSMUSG00185029887	lncRNA gene	Chr17:44324282-44326540 (+)
FVB/NJ	ENSMUSG00205053059	lncRNA gene	Chr17:41897639-41899909 (+)
JF1/MsJ	ENSUMUG00000040423	lncRNA gene	Chr17:43932019-43934235 (+)
LP/J	ENSMUSG00230041662	lncRNA gene	Chr17:45206958-45209215 (+)
NOD/ShiLtJ	ENSMUSG00190018910	lncRNA gene	Chr17:41296156-41298414 (+)
NZO/HlLtJ	ENSMUSG00225043840	lncRNA gene	Chr17:47474160-47476425 (+)
PWK/PhJ	ENSLUMG00010037346	lncRNA gene	Chr17:41169130-41171572 (+)
SPRET/EiJ	ENSMSPG00010039327	lncRNA gene	Chr17:41394214-41396455 (+)
WSB/EiJ	ENSIUOG00005028659	lncRNA gene	Chr17:42268886-42271128 (+)

Homology

• Gene Tree
  Gm17080
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000067389 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000067389	Ensembl Gene Model | MGI Sequence Detail	2258	C57BL/6J
transcript	ENSMUST00000087588	Ensembl | MGI Sequence Detail	811	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;