Gm17055 Gene Detail

Summary

• Symbol
  Gm17055
• Name
  predicted gene 17055

• Feature Type
  lncRNA gene
• IDs
  MGI:4937882
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr6:108633858-108636554 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 49.84 cM

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937882	lncRNA gene	Chr6:108633858-108636554 (+)
129S1/SvImJ	ENSMUSG00200025959	lncRNA gene	Chr6:105665877-105668503 (+)
A/J	ENSMUSG00195017035	lncRNA gene	Chr6:105298948-105301547 (+)
AKR/J	ENSMUSG00220035777	lncRNA gene	Chr6:104208593-104211193 (+)
BALB/cJ	ENSMUSG00180002370	lncRNA gene	Chr6:105672078-105674677 (+)
C3H/HeJ	ENSMUSG00175017235	lncRNA gene	Chr6:71729472-71732070 (-)
C57BL/6NJ	ENSMUSG00215024597	lncRNA gene	Chr6:105703965-105706586 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013768	unclassified non-coding RNA gene	Chr6:104021663-104024317 (+)
CAST/EiJ	ENSTCUG00005030333	lncRNA gene	Chr6:105578805-105581433 (+)
CBA/J	ENSMUSG00210020900	lncRNA gene	Chr6:105528924-105531522 (+)
DBA/2J	ENSMUSG00185018898	lncRNA gene	Chr6:105970324-105972933 (+)
FVB/NJ	ENSMUSG00205028756	lncRNA gene	Chr6:104616511-104619135 (+)
JF1/MsJ	ENSUMUG00000032553	lncRNA gene	Chr6:104725227-104727836 (+)
LP/J	ENSMUSG00230001758	lncRNA gene	Chr6:107172265-107174891 (+)
NOD/ShiLtJ	ENSMUSG00190018372	lncRNA gene	Chr6:105138467-105141088 (+)
NZO/HlLtJ	ENSMUSG00225005623	lncRNA gene	Chr6:109110426-109113025 (+)
PWK/PhJ	ENSLUMG00010027868	lncRNA gene	Chr6:104219717-104222305 (+)
SPRET/EiJ	ENSMSPG00010014743	lncRNA gene	Chr6:106816288-106818878 (+)
WSB/EiJ	ENSIUOG00005025164	lncRNA gene	Chr6:105930784-105933410 (+)

Homology

• Gene Tree
  Gm17055
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm17055
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000090576 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090576	Ensembl Gene Model | MGI Sequence Detail	2697	C57BL/6J
transcript	ENSMUST00000204397	Ensembl | MGI Sequence Detail	2549	Not Applicable

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376

TSS for Gm17055:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr58067	Chr6:108635571-108635582 (+)	1,719 bp
Tssr58068	Chr6:108635615-108635631 (+)	1,765 bp