Gm17036 Gene Detail

Summary

• Symbol
  Gm17036
• Name
  predicted gene 17036

• Feature Type
  lncRNA gene
• IDs
  MGI:4937863
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:6213913-6227324 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 4.46 cM

Strain
Comparison

• SNPs within 2kb
  362 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937863	lncRNA gene	Chr18:6213913-6227324 (+)
129S1/SvImJ	ENSMUSG00200025534	lncRNA gene	Chr18:3134492-3147884 (+)
A/J	ENSMUSG00195008902	lncRNA gene	Chr18:3326224-3339635 (+)
AKR/J	ENSMUSG00220019421	lncRNA gene	Chr18:3326801-3340193 (+)
BALB/cJ	ENSMUSG00180005366	lncRNA gene	Chr18:3797181-3810561 (+)
C3H/HeJ	ENSMUSG00175008122	lncRNA gene	Chr18:3332638-3346016 (+)
C57BL/6NJ	ENSMUSG00215025291	lncRNA gene	Chr18:3047015-3060431 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003048	antisense lncRNA gene	Chr18:2872945-2886093 (+)
CAST/EiJ	ENSTCUG00005017189	lncRNA gene	Chr18:3284277-3297693 (+)
CBA/J	ENSMUSG00210021957	lncRNA gene	Chr18:3339455-3352837 (+)
DBA/2J	ENSMUSG00185030514	lncRNA gene	Chr18:3325950-3339365 (+)
FVB/NJ	ENSMUSG00205034782	lncRNA gene	Chr18:3107029-3120444 (+)
JF1/MsJ	ENSUMUG00000040236	lncRNA gene	Chr18:3355415-3368859 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010222	lncRNA gene	Chr18:3098636-3112051 (+)
NZO/HlLtJ	ENSMUSG00225035094	lncRNA gene	Chr18:5309080-5322487 (+)
PWK/PhJ	ENSLUMG00010009714	lncRNA gene	Chr18:3531034-3544454 (+)
SPRET/EiJ	ENSMSPG00010011808	lncRNA gene	Chr18:3064804-3078195 (+)
WSB/EiJ	ENSIUOG00005027864	lncRNA gene	Chr18:3242828-3256235 (+)

Homology

• Gene Tree
  Gm17036
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091165 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091165	Ensembl Gene Model | MGI Sequence Detail	13412	C57BL/6J
transcript	ENSMUST00000168187	Ensembl | MGI Sequence Detail	254	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5