Gm17034 Gene Detail

Summary

• Symbol
  Gm17034
• Name
  predicted gene 17034

• Feature Type
  lncRNA gene
• IDs
  MGI:4937861
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:82741263-82744269 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 35.94 cM

Strain
Comparison

• SNPs within 2kb
  61 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937861	lncRNA gene	Chr6:82741263-82744269 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004295	antisense lncRNA gene	Chr6:83747849-83750862 (+)
A/J	MGP_AJ_G0004272	antisense lncRNA gene	Chr6:80550140-80553144 (+)
AKR/J	MGP_AKRJ_G0004254	antisense lncRNA gene	Chr6:82858550-82861554 (+)
BALB/cJ	MGP_BALBcJ_G0004259	antisense lncRNA gene	Chr6:80563698-80566704 (+)
C3H/HeJ	MGP_C3HHeJ_G0004246	antisense lncRNA gene	Chr6:101518075-101521081 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004408	antisense lncRNA gene	Chr6:86011953-86014959 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003881	antisense lncRNA gene	Chr6:78903978-78907094 (+)
CAST/EiJ	MGP_CASTEiJ_G0004169	antisense lncRNA gene	Chr6:82854160-82857178 (+)
CBA/J	MGP_CBAJ_G0004201	antisense lncRNA gene	Chr6:89426705-89429711 (+)
DBA/2J	MGP_DBA2J_G0004217	antisense lncRNA gene	Chr6:79870973-79873979 (+)
FVB/NJ	MGP_FVBNJ_G0004233	antisense lncRNA gene	Chr6:79078625-79081631 (+)
LP/J	MGP_LPJ_G0004296	antisense lncRNA gene	Chr6:83738071-83741084 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004223	antisense lncRNA gene	Chr6:93739000-93742006 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004406	antisense lncRNA gene	Chr6:82678213-82681233 (+)
PWK/PhJ	MGP_PWKPhJ_G0004122	antisense lncRNA gene	Chr6:78757330-78760352 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004066	antisense lncRNA gene	Chr6:81538771-81541807 (+)
WSB/EiJ	MGP_WSBEiJ_G0004205	antisense lncRNA gene	Chr6:83118527-83121541 (+)

Homology

• Gene Tree
  Gm17034
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Endonuclease-mediated
  1
• Gene trapped
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm17034
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000090293 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090293	Ensembl Gene Model | MGI Sequence Detail	3007	C57BL/6J
transcript	ENSMUST00000168990	Ensembl | MGI Sequence Detail	2229	Not Applicable

References

• Summaries
  All 8

  Phenotypes 6
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)