Gm17638 Gene Detail

Summary

• Symbol
  Gm17638
• Name
  predicted gene, 17638

• Feature Type
  lncRNA gene
• IDs
  MGI:4937272
  NCBI Gene: 100504021
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:77845874-77851326 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 36.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  301 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937272	lncRNA gene	Chr15:77845874-77851326 (+)
129S1/SvImJ	ENSMUSG00200054024	lncRNA gene	Chr15:74954055-74959507 (+)
A/J	ENSMUSG00195052095	lncRNA gene	Chr15:74896302-74901754 (+)
AKR/J	ENSMUSG00220053284	lncRNA gene	Chr15:74939845-74945297 (+)
BALB/cJ	ENSMUSG00180053615	lncRNA gene	Chr15:74773358-74778810 (+)
C3H/HeJ	ENSMUSG00175053557	lncRNA gene	Chr15:75084736-75090188 (+)
C57BL/6NJ	ENSMUSG00215052753	lncRNA gene	Chr15:74853114-74858566 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005096	lincRNA gene	Chr15:71961463-71966984 (+)
CAST/EiJ	ENSTCUG00005048142	lncRNA gene	Chr15:74398538-74403998 (+)
CBA/J	ENSMUSG00210049795	lncRNA gene	Chr15:74859950-74865402 (+)
DBA/2J	ENSMUSG00185051317	lncRNA gene	Chr15:74869314-74874766 (+)
FVB/NJ	ENSMUSG00205052616	lncRNA gene	Chr15:74589480-74594932 (+)
JF1/MsJ	ENSUMUG00000055937	lncRNA gene	Chr15:74440601-74446063 (+)
LP/J	ENSMUSG00230052804	lncRNA gene	Chr15:78202550-78208002 (+)
NOD/ShiLtJ	ENSMUSG00190054027	lncRNA gene	Chr15:74882894-74888346 (+)
NZO/HlLtJ	ENSMUSG00225054203	lncRNA gene	Chr15:78533805-78539257 (+)
PWK/PhJ	ENSLUMG00010053163	lncRNA gene	Chr15:74671261-74676707 (+)
SPRET/EiJ	ENSMSPG00010051490	lncRNA gene	Chr15:76334190-76339666 (+)
WSB/EiJ	ENSIUOG00005049746	lncRNA gene	Chr15:74935228-74940686 (+)

Homology

• Gene Tree
  Gm17638
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  19 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm17638
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000097057 (Evidence)
• NCBI Gene
  100504021

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097057	Ensembl Gene Model | MGI Sequence Detail	5453	C57BL/6J
transcript	ENSMUST00000181255	Ensembl | MGI Sequence Detail	4343	Not Applicable

References

• Summaries
  All 22

  Phenotypes 19
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm17638:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131889	Chr15:77850873-77850896 (+)	5,011 bp