Gm17634 Gene Detail

Summary

• Symbol
  Gm17634
• Name
  predicted gene, 17634

• Feature Type
  lncRNA gene
• IDs
  MGI:4937268
  NCBI Gene: 100504568
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr1:105283732-105289462 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 49.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  216 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937268	lncRNA gene	Chr1:105283732-105289585 (+)
129S1/SvImJ	ENSMUSG00200000475	lncRNA gene	Chr1:102576942-102582815 (+)
A/J	ENSMUSG00195008045	lncRNA gene	Chr1:102051338-102057218 (+)
AKR/J	ENSMUSG00220000319	lncRNA gene	Chr1:102129753-102135640 (+)
BALB/cJ	ENSMUSG00180000496	lncRNA gene	Chr1:102338649-102344530 (+)
C3H/HeJ	ENSMUSG00175000595	lncRNA gene	Chr1:102267749-102273631 (+)
C57BL/6NJ	ENSMUSG00215007570	lncRNA gene	Chr1:102278138-102283987 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002382	antisense lncRNA gene	Chr1:98088824-98094563 (+)
CAST/EiJ	ENSTCUG00005002957	lncRNA gene	Chr1:101633294-101639227 (+)
CBA/J	ENSMUSG00210000219	lncRNA gene	Chr1:102148998-102154882 (+)
DBA/2J	ENSMUSG00185008623	lncRNA gene	Chr1:106600190-106606070 (+)
FVB/NJ	ENSMUSG00205008738	lncRNA gene	Chr1:101433029-101438914 (+)
JF1/MsJ	ENSUMUG00000000271	lncRNA gene	Chr1:105206552-105212423 (+)
LP/J	ENSMUSG00230000280	lncRNA gene	Chr1:105863053-105868916 (+)
NOD/ShiLtJ	ENSMUSG00190000590	lncRNA gene	Chr1:102229844-102235717 (+)
NZO/HlLtJ	ENSMUSG00225000420	lncRNA gene	Chr1:109744311-109750191 (+)
PWK/PhJ	ENSLUMG00010000211	lncRNA gene	Chr1:101629335-101635219 (+)
SPRET/EiJ	ENSMSPG00010000626	lncRNA gene	Chr1:103881609-103887437 (+)
WSB/EiJ	ENSIUOG00005001094	lncRNA gene	Chr1:101941549-101947439 (+)

Homology

• Gene Tree
  Gm17634
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm17634
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000097482 (Evidence)
• NCBI Gene
  100504568

Representative Sequences			Length	Strain/Species
genomic	100504568	NCBI Gene Model | MGI Sequence Detail	5731	C57BL/6J
transcript	NR_151538	RefSeq | MGI Sequence Detail	1392	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm17634:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8255	Chr1:105284442-105284493 (+)	736 bp
Tssr8256	Chr1:105284494-105284511 (+)	771 bp
Tssr8257	Chr1:105284571-105284582 (+)	845 bp
Tssr8258	Chr1:105284784-105284814 (+)	1,067 bp