Gm17613 Gene Detail

Summary

• Symbol
  Gm17613
• Name
  predicted gene, 17613

• Feature Type
  lncRNA gene
• IDs
  MGI:4937247
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:120986367-120987477 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 64.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937247	lncRNA gene	Chr14:120986367-120987477 (+)
129S1/SvImJ	ENSMUSG00200025229	lncRNA gene	Chr14:109876913-109877790 (+)
A/J	ENSMUSG00195031570	lncRNA gene	Chr14:109622411-109623288 (+)
AKR/J	ENSMUSG00220007893	lncRNA gene	Chr14:109429747-109430624 (+)
BALB/cJ	ENSMUSG00180028437	lncRNA gene	Chr14:109114305-109115182 (+)
C3H/HeJ	ENSMUSG00175005889	lncRNA gene	Chr14:111038481-111039358 (+)
C57BL/6NJ	ENSMUSG00215028023	lncRNA gene	Chr14:109253519-109254396 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007420	lncRNA gene	Chr14:110666636-110666815 (+)
CBA/J	ENSMUSG00210027351	lncRNA gene	Chr14:109999535-110000412 (+)
DBA/2J	ENSMUSG00185014083	lncRNA gene	Chr14:115160418-115161295 (+)
FVB/NJ	ENSMUSG00205008197	lncRNA gene	Chr14:108708127-108709004 (+)
JF1/MsJ	ENSUMUG00000030503	lncRNA gene	Chr14:126176992-126177172 (+)
LP/J	ENSMUSG00230013206	lncRNA gene	Chr14:127131883-127132760 (+)
NOD/ShiLtJ	ENSMUSG00190025644	lncRNA gene	Chr14:109833322-109834199 (+)
NZO/HlLtJ	ENSMUSG00225029342	lncRNA gene	Chr14:117196677-117197554 (+)
PWK/PhJ	ENSLUMG00010029838	lncRNA gene	Chr14:109096354-109096534 (+)
SPRET/EiJ	ENSMSPG00010014934	lncRNA gene	Chr14:113380674-113380853 (+)
WSB/EiJ	ENSIUOG00005031384	lncRNA gene	Chr14:109041736-109042613 (+)

Homology

• Gene Tree
  Gm17613
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17613
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000090284 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090284	Ensembl Gene Model | MGI Sequence Detail	1111	C57BL/6J
transcript	ENSMUST00000355256	Ensembl | MGI Sequence Detail	678	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;