Gm17590 Gene Detail

Summary

• Symbol
  Gm17590
• Name
  predicted gene, 17590

• Feature Type
  lncRNA gene
• IDs
  MGI:4937224
  NCBI Gene: 100579155
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:3522845-3530877 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 2.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  288 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937224	lncRNA gene	Chr5:3522845-3530877 (-)
129S1/SvImJ	ENSMUSG00200002859	lncRNA gene	Chr5:119292-127296 (-)
A/J	ENSMUSG00195012276	lncRNA gene	Chr5:187675-195689 (-)
AKR/J	ENSMUSG00220002276	lncRNA gene	Chr5:119301-127315 (-)
BALB/cJ	ENSMUSG00180051187	lncRNA gene	Chr19:118053-126053 (-)
C3H/HeJ	ENSMUSG00175029954	lncRNA gene	Chr5:124514-132526 (-)
C57BL/6NJ	ENSMUSG00215027108	lncRNA gene	Chr5:428545-436557 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003622	antisense lncRNA gene	Chr5:200686-207876 (-)
CAST/EiJ	ENSTCUG00005001773	lncRNA gene	Chr5:336890-344837 (-)
CBA/J	ENSMUSG00210002768	lncRNA gene	Chr5:489258-497266 (-)
DBA/2J	ENSMUSG00185029252	lncRNA gene	Chr5:492843-500855 (-)
FVB/NJ	ENSMUSG00205008576	lncRNA gene	Chr5:185074-193094 (-)
JF1/MsJ	ENSUMUG00000004757	lncRNA gene	Chr5:505349-513319 (-)
LP/J	ENSMUSG00230003453	lncRNA gene	Chr5:4363844-4371848 (-)
NOD/ShiLtJ	ENSMUSG00190012812	lncRNA gene	Chr5:119894-127862 (-)
NZO/HlLtJ	ENSMUSG00225006691	lncRNA gene	Chr5:8199353-8207365 (-)
PWK/PhJ	ENSLUMG00010019636	lncRNA gene	Chr5:469619-477657 (-)
SPRET/EiJ	ENSMSPG00010005022	lncRNA gene	Chr5:308508-316374 (-)
WSB/EiJ	ENSIUOG00005026950	lncRNA gene	Chr5:182329-190327 (-)

Homology

• Gene Tree
  Gm17590
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• UniProt
  1

• Ensembl
  ENSMUSG00000106588 (Evidence)
• NCBI Gene
  100579155

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106588	Ensembl Gene Model | MGI Sequence Detail	8033	C57BL/6J
transcript	ENSMUST00000197881	Ensembl | MGI Sequence Detail	1252	Not Applicable
polypeptide	Q3TN47	UniProt | EBI | MGI Sequence Detail	35	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm17590:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49985	Chr5:3530863-3530884 (-)	3 bp