Gm17541 Pseudogene Detail

Summary

• Symbol
  Gm17541
• Name
  predicted gene, 17541

• Feature Type
  pseudogene
• IDs
  MGI:4937175
  NCBI Gene: 100416664
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:4739405-4739917 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 2.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937175	pseudogene	Chr12:4739402-4739926 (-)
129S1/SvImJ	ENSMUSG00200025040	pseudogene	Chr12:1699389-1699913 (-)
A/J	ENSMUSG00195016142	pseudogene	Chr12:1727122-1727646 (-)
AKR/J	ENSMUSG00220033389	pseudogene	Chr12:1724666-1725190 (-)
BALB/cJ	ENSMUSG00180015372	pseudogene	Chr12:1723592-1724116 (-)
C3H/HeJ	ENSMUSG00175009980	pseudogene	Chr12:1708625-1709149 (-)
C57BL/6NJ	ENSMUSG00215022837	pseudogene	Chr12:1654216-1654740 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017586	protein coding gene	Chr12:1490817-1491356 (-)
CAST/EiJ	ENSTCUG00005023428	pseudogene	Chr12:1545237-1545758 (-)
CBA/J	ENSMUSG00210013623	pseudogene	Chr12:1728329-1728853 (-)
DBA/2J	ENSMUSG00185022116	pseudogene	Chr12:1706348-1706872 (-)
FVB/NJ	ENSMUSG00205003739	pseudogene	Chr12:1504050-1504574 (-)
JF1/MsJ	ENSUMUG00000035531	pseudogene	Chr12:1710555-1711076 (-)
LP/J	ENSMUSG00230012072	pseudogene	Chr12:3534419-3534943 (-)
NOD/ShiLtJ	ENSMUSG00190008138	pseudogene	Chr12:2946094-2946618 (-)
NZO/HlLtJ	ENSMUSG00225019216	pseudogene	Chr12:5594505-5595029 (-)
PWK/PhJ	ENSLUMG00010017425	pseudogene	Chr12:1530261-1530782 (-)
SPRET/EiJ	ENSMSPG00010005087	pseudogene	Chr12:1940897-1941399 (-)
WSB/EiJ	ENSIUOG00005002392	pseudogene	Chr12:1710682-1711206 (-)

Homology

• Gene Tree
  Gm17541
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  5 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000091732 (Evidence)
• NCBI Gene
  100416664

Representative Sequences			Length	Strain/Species
genomic	100416664	NCBI Gene Model | MGI Sequence Detail	513	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm17541:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115644	Chr12:4739951-4739955 (-)	-36 bp