Gm17521 Gene Detail

Summary

• Symbol
  Gm17521
• Name
  predicted gene, 17521

• Feature Type
  lncRNA gene
• IDs
  MGI:4937155
  NCBI Gene: 102637548
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:121938875-121939372 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 49.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937155	lncRNA gene	ChrX:121938875-121939372 (-)
129S1/SvImJ	ENSMUSG00200012008	lncRNA gene	ChrX:103774480-103774977 (-)
A/J	ENSMUSG00195020759	lncRNA gene	ChrX:107426400-107426897 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180018999	lncRNA gene	ChrX:104058422-104058919 (-)
C3H/HeJ	ENSMUSG00175021916	lncRNA gene	ChrX:107703351-107703848 (-)
C57BL/6NJ	ENSMUSG00215002738	lncRNA gene	ChrX:105188701-105189198 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008040	lncRNA gene	ChrX:105157817-105158314 (-)
CBA/J	ENSMUSG00210021102	lncRNA gene	ChrX:104536380-104536877 (-)
DBA/2J	ENSMUSG00185024215	lncRNA gene	ChrX:117103266-117103763 (-)
FVB/NJ	ENSMUSG00205012131	lncRNA gene	ChrX:103622730-103623227 (-)
JF1/MsJ	ENSUMUG00000011039	lncRNA gene	ChrX:137632289-137632786 (-)
LP/J	ENSMUSG00230003920	lncRNA gene	ChrX:123725259-123725756 (-)
NOD/ShiLtJ	ENSMUSG00190014902	lncRNA gene	ChrX:103889432-103889929 (+)
NZO/HlLtJ	ENSMUSG00225033671	lncRNA gene	ChrX:128898665-128899162 (-)
PWK/PhJ	ENSLUMG00010009370	lncRNA gene	ChrX:102873572-102874069 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005004982	lncRNA gene	ChrX:104230180-104230677 (-)

Homology

• Gene Tree
  Gm17521
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000094864 (Evidence)
• NCBI Gene
  102637548

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094864	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000165345	Ensembl | MGI Sequence Detail	468	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;