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Ighd5-1 Pseudogene Detail
Summary
  • Symbol
    Ighd5-1
  • Name
    immunoglobulin heavy diversity 5-1
  • Synonyms
    Gm17483
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:4937117
    NCBI Gene: 777682
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:113490420-113490429 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.11 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4937117
 pseudogenic gene segment Chr12:113490420-113490429 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000026
 pseudogenic gene segment Chr12:116081334-116081343 (-)
A/J MGP_AJ_G0000029
 pseudogenic gene segment Chr12:111584575-111584584 (-)
AKR/J MGP_AKRJ_G0000030
 pseudogenic gene segment Chr12:114878453-114878462 (-)
BALB/cJ MGP_BALBcJ_G0000027
 pseudogenic gene segment Chr12:112047662-112047671 (-)
C3H/HeJ MGP_C3HHeJ_G0000023
 pseudogenic gene segment Chr12:115344071-115344080 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000033
 pseudogenic gene segment Chr12:119611239-119611248 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000028
 pseudogenic gene segment Chr12:110238684-110238693 (-)
CBA/J MGP_CBAJ_G0000023
 pseudogenic gene segment Chr12:124206837-124206846 (-)
DBA/2J MGP_DBA2J_G0000026
 pseudogenic gene segment Chr12:111083739-111083748 (-)
FVB/NJ MGP_FVBNJ_G0000023
 pseudogenic gene segment Chr12:109912477-109912486 (-)
LP/J MGP_LPJ_G0000029
 pseudogenic gene segment Chr12:115945489-115945498 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000025
 pseudogenic gene segment Chr12:127303170-127303179 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000033
 pseudogenic gene segment Chr12:114324883-114324892 (-)
PWK/PhJ MGP_PWKPhJ_G0000020
 pseudogenic gene segment Chr12:105795285-105795294 (+)
SPRET/EiJ MGP_SPRETEiJ_G0000018
 pseudogenic gene segment Chr12:108497814-108497823 (-)
WSB/EiJ MGP_WSBEiJ_G0000026
 pseudogenic gene segment Chr12:115262070-115262079 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 777682 NCBI Gene Model | MGI Sequence Detail 10 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory