Gm17324 Gene Detail

Summary

• Symbol
  Gm17324
• Name
  predicted gene, 17324

• Feature Type
  lncRNA gene
• IDs
  MGI:4936958
  NCBI Gene: 100579154
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:78355147-78356068 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4936958	lncRNA gene	Chr9:78355147-78356068 (-)
129S1/SvImJ	ENSMUSG00200019835	lncRNA gene	Chr9:75506004-75506937 (-)
A/J	ENSMUSG00195010976	lncRNA gene	Chr9:75290181-75291102 (-)
AKR/J	ENSMUSG00220015354	lncRNA gene	Chr9:75396492-75397413 (-)
BALB/cJ	ENSMUSG00180018658	lncRNA gene	Chr9:75403719-75404640 (-)
C3H/HeJ	ENSMUSG00175012208	lncRNA gene	Chr9:75462574-75463495 (-)
C57BL/6NJ	ENSMUSG00215016329	lncRNA gene	Chr9:75341932-75342853 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032469	protein coding gene	Chr9:75458525-75459458 (-)
CAST/EiJ	ENSTCUG00005010184	lncRNA gene	Chr9:75041524-75042455 (-)
CBA/J	ENSMUSG00210013353	lncRNA gene	Chr9:75495496-75496417 (-)
DBA/2J	ENSMUSG00185008599	lncRNA gene	Chr9:75523810-75524731 (-)
FVB/NJ	ENSMUSG00205030683	lncRNA gene	Chr9:75684521-75685442 (-)
JF1/MsJ	ENSUMUG00000039980	lncRNA gene	Chr9:75432125-75433058 (-)
LP/J	ENSMUSG00230025741	lncRNA gene	Chr9:75657597-75658530 (-)
NOD/ShiLtJ	ENSMUSG00190038896	lncRNA gene	Chr9:75599895-75600816 (-)
NZO/HlLtJ	ENSMUSG00225025588	lncRNA gene	Chr9:75821759-75822680 (-)
PWK/PhJ	ENSLUMG00010016902	lncRNA gene	Chr9:75365182-75366114 (-)
SPRET/EiJ	ENSMSPG00010004084	lncRNA gene	Chr9:76592463-76593395 (-)
WSB/EiJ	ENSIUOG00005025783	lncRNA gene	Chr9:74929101-74930022 (-)

Homology

• Gene Tree
  Gm17324
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17324
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  5 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000090317 (Evidence)
• NCBI Gene
  100579154

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090317	Ensembl Gene Model | MGI Sequence Detail	922	C57BL/6J
transcript	ENSMUST00000165499	Ensembl | MGI Sequence Detail	922	Not Applicable
polypeptide	Q8C6J8	UniProt | EBI | MGI Sequence Detail	137	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9