Gm17315 Gene Detail

Summary

• Symbol
  Gm17315
• Name
  predicted gene, 17315

• Feature Type
  lncRNA gene
• IDs
  MGI:4936949
  NCBI Gene: 102639145
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:79662128-79665449 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 50.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4936949	lncRNA gene	Chr17:79661580-79665452 (+)
129S1/SvImJ	ENSMUSG00200024932	lncRNA gene	Chr17:75021690-75025017 (+)
A/J	ENSMUSG00195028335	lncRNA gene	Chr17:76376529-76379859 (+)
AKR/J	ENSMUSG00220013963	lncRNA gene	Chr17:75284232-75287564 (+)
BALB/cJ	ENSMUSG00180005019	lncRNA gene	Chr17:76086246-76089576 (+)
C3H/HeJ	ENSMUSG00175016701	lncRNA gene	Chr17:75364100-75367427 (+)
C57BL/6NJ	ENSMUSG00215015265	lncRNA gene	Chr17:75089183-75092506 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015556	lncRNA gene	Chr17:75956775-75960111 (+)
CBA/J	ENSMUSG00210020574	lncRNA gene	Chr17:75227446-75230773 (+)
DBA/2J	ENSMUSG00185012891	lncRNA gene	Chr17:78060964-78064291 (+)
FVB/NJ	ENSMUSG00205031849	lncRNA gene	Chr17:75842091-75845418 (+)
JF1/MsJ	ENSUMUG00000024841	lncRNA gene	Chr17:77768642-77771965 (+)
LP/J	ENSMUSG00230022034	lncRNA gene	Chr17:79062563-79065890 (+)
NOD/ShiLtJ	ENSMUSG00190009801	lncRNA gene	Chr17:75126216-75129543 (+)
NZO/HlLtJ	ENSMUSG00225031546	lncRNA gene	Chr17:81323534-81326861 (+)
PWK/PhJ	ENSLUMG00010005698	lncRNA gene	Chr17:75014248-75017571 (+)
SPRET/EiJ	ENSMSPG00010008910	lncRNA gene	Chr17:75475405-75478726 (+)
WSB/EiJ	ENSIUOG00005010681	lncRNA gene	Chr17:76061239-76064565 (+)

Homology

• Gene Tree
  Gm17315
  

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000118651 (Evidence)
• NCBI Gene
  102639145

Representative Sequences			Length	Strain/Species
genomic	102639145	NCBI Gene Model | MGI Sequence Detail	3322	C57BL/6J
transcript	NR_165822	RefSeq | MGI Sequence Detail	2502	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;