Gm17241 Pseudogene Detail

Summary

• Symbol
  Gm17241
• Name
  predicted gene, 17241

• Feature Type
  pseudogene
• IDs
  MGI:4936875
  NCBI Gene: 100462741
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:99604443-99604694 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 56.13 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4936875	pseudogene	Chr15:99604386-99604727 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195047246	pseudogene	Chr15:96674181-96674432 (-)
AKR/J	ENSMUSG00220040228	pseudogene	Chr5:19481450-19481701 (-)
AKR/J	ENSMUSG00220050430	pseudogene	Chr15:96680980-96681231 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175054541	pseudogene	Chr11:66457634-66457886 (+)
C3H/HeJ	ENSMUSG00175046941	pseudogene	Chr15:96854172-96854423 (-)
C57BL/6NJ	ENSMUSG00215051355	pseudogene	Chr15:96642861-96643112 (-)
C57BL/6NJ	ENSMUSG00215055185	pseudogene	Chr11:66234007-66234259 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185044831	pseudogene	Chr15:96687381-96687632 (-)
FVB/NJ	ENSMUSG00205047318	pseudogene	Chr15:96391846-96392097 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225043168	pseudogene	Chr15:100279720-100279971 (-)
PWK/PhJ	ENSLUMG00010050914	pseudogene	Chr15:96362451-96362702 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005053071	pseudogene	Chr11:66440270-66440522 (+)
WSB/EiJ	ENSIUOG00005051956	pseudogene	Chr19:1461289-1461540 (+)
WSB/EiJ	ENSIUOG00005042764	pseudogene	Chr15:96767911-96768162 (-)

Homology

• Gene Tree
  Gm17241
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17241
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000115938 (Evidence)
• NCBI Gene
  100462741

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115938	Ensembl Gene Model | MGI Sequence Detail	252	C57BL/6J
transcript	ENSMUST00000230504	Ensembl | MGI Sequence Detail	252	Not Applicable

References

• Summaries
  All 23

  Phenotypes 20
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm17241:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr136388	Chr15:99604727-99604728 (-)	-34 bp