Mir3059 Gene Detail

Summary

• Symbol
  Mir3059
• Name
  microRNA 3059
• Synonyms
  mmu-mir-3059

• Feature Type
  miRNA gene
• IDs
  MGI:4834225
  NCBI Gene: 100526516
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:101608553-101608633 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 53.06 cM

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834225	miRNA gene	Chr10:101608553-101608633 (+)
129S1/SvImJ	ENSMUSG00200020309	miRNA gene	Chr10:98094160-98094240 (+)
A/J	ENSMUSG00195017858	miRNA gene	Chr10:98525621-98525701 (+)
AKR/J	ENSMUSG00220026155	miRNA gene	Chr10:98080598-98080678 (+)
BALB/cJ	ENSMUSG00180010263	miRNA gene	Chr10:98532985-98533065 (+)
C3H/HeJ	ENSMUSG00175006137	miRNA gene	Chr10:98414431-98414511 (+)
C57BL/6NJ	ENSMUSG00215007622	miRNA gene	Chr10:98127060-98127140 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007056	miRNA gene	Chr10:95230168-95230248 (+)
CAST/EiJ	ENSTCUG00005006330	miRNA gene	Chr10:97691793-97691873 (+)
CBA/J	ENSMUSG00210023088	miRNA gene	Chr10:98305386-98305466 (+)
DBA/2J	ENSMUSG00185019367	miRNA gene	Chr10:98475148-98475228 (+)
FVB/NJ	ENSMUSG00205004114	miRNA gene	Chr10:97948721-97948801 (+)
JF1/MsJ	ENSUMUG00000031786	miRNA gene	Chr10:99882953-99883033 (+)
LP/J	ENSMUSG00230022865	miRNA gene	Chr10:100393489-100393569 (+)
NOD/ShiLtJ	ENSMUSG00190028468	miRNA gene	Chr10:98587841-98587921 (+)
NZO/HlLtJ	ENSMUSG00225040939	miRNA gene	Chr10:104624644-104624724 (+)
PWK/PhJ	ENSLUMG00010006166	miRNA gene	Chr10:98152831-98152911 (+)
SPRET/EiJ	ENSMSPG00010010740	miRNA gene	Chr10:99904950-99905030 (+)
WSB/EiJ	ENSIUOG00005013684	miRNA gene	Chr10:98209565-98209645 (+)

Homology

• Human Ortholog
  MIR3059, microRNA 3059

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR3059, microRNA 3059
  
• Links
  HGNC:54162

  NCBI Gene ID: 113839519

  
  
• Chr Location
  12q21.32; chr12:86745068-86745149 (-)  GRCh38

---

• MGI Vertebrate Homology
  Mir3059 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR3059
• Gene Tree
  Mir3059
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir3059
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  599
• Tissues
  2
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000092952 (Evidence)
• NCBI Gene
  100526516

Representative Sequences			Length	Strain/Species
genomic	100526516	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	NR_037211	RefSeq | MGI Sequence Detail	81	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  Primer pair 1

Other Database
Links

miRBase

MI0004412

References

• Summaries
  All 11

  Developmental Gene Expression 1

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:279273 Chen G, et al., Regional difference in microRNA regulation in the skull vault. Dev Dyn. 2019 Oct;248(10):1009-1019