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Trim34b Gene Detail
Summary
  • Symbol
    Trim34b
  • Name
    tripartite motif-containing 34B
  • Synonyms
    Gm15134, Trim34-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:4821264
    NCBI Gene: 434218
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:103978678-103986116 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 55.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4821264
 protein coding gene Chr7:103978678-103991478 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032711
 protein coding gene Chr7:107470673-107486235 (+)
A/J MGP_AJ_G0032686
 protein coding gene Chr7:104660735-104672153 (+)
AKR/J MGP_AKRJ_G0032619
 protein coding gene Chr7:107184915-107297285 (+)
BALB/cJ MGP_BALBcJ_G0032696
 protein coding gene Chr7:104393362-104404090 (+)
C3H/HeJ MGP_C3HHeJ_G0032407
 protein coding gene Chr7:107542140-107551515 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033194
 protein coding gene Chr7:111638916-111651643 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030186
 protein coding gene Chr7:106756237-106764012 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0032375
 protein coding gene Chr7:115449313-115463840 (+)
DBA/2J MGP_DBA2J_G0032529
 protein coding gene Chr7:102995959-103007253 (+)
FVB/NJ MGP_FVBNJ_G0032482
 protein coding gene Chr7:102703408-102713924 (+)
LP/J MGP_LPJ_G0032622
 protein coding gene Chr7:108804216-108814650 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0033219
 protein coding gene Chr7:106388806-106406048 (+)
PWK/PhJ MGP_PWKPhJ_G0031450
 protein coding gene Chr7:95985245-96004444 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031295
 protein coding gene Chr7:93612565-93624692 (+)
WSB/EiJ MGP_WSBEiJ_G0031851
 protein coding gene Chr7:107130775-107143198 (+)



Homology
more
  • Human Ortholog
    TRIM34, tripartite motif containing 34
  • Vertebrate Orthologs
    9
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRIM34, tripartite motif containing 34
  • Synonyms
    IFP1, RNF21
  • Links
    NCBI Gene ID: 53840
    neXtProt AC: NX_Q9BYJ4
    UniProt: Q9BYJ4

  • Chr Location
    11p15.4; chr11:5619764-5644398 (+)  GRCh38
  • Human Ortholog
    TRIM6-TRIM34, TRIM6-TRIM34 readthrough
  • Synonyms
    IFP1, RNF21, RNF89, TRIM34, TRIM6
  • Links
    NCBI Gene ID: 445372

  • Chr Location
    11p15.4; chr11:5596637-5644398 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    750
  • Tissues
    44
  • cDNA Data
    1
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090215 Ensembl Gene Model | MGI Sequence Detail 7439 C57BL/6J ±  kb
transcript ENSMUST00000106847 Ensembl | MGI Sequence Detail 1827 Not Applicable  
polypeptide ENSMUSP00000102460 Ensembl | MGI Sequence Detail 485 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
Other
Accession IDs
less
MGI:3805550
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:162981 Tareen SU, et al., An expanded clade of rodent Trim5 genes. Virology. 2009 Mar 15;385(2):473-83
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory