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Trim30e-ps1 Pseudogene Detail
Summary
  • Symbol
    Trim30e-ps1
  • Name
    tripartite motif-containing 30E, pseudogene 1
  • Synonyms
    Trim30-4
Location &
Maps
more
  • Sequence Map
    Chr7:104182815-104184058 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 55.69 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4821258
 pseudogene Chr7:104182166-104184568 (-)
129S1/SvImJ ENSMUSG00200050885
 pseudogene Chr7:90893842-90896253 (-)
A/J ENSMUSG00195054864
 pseudogene Chr7:95396419-95398830 (-)
AKR/J ENSMUSG00220051806
 pseudogene Chr7:88770448-88772859 (-)
BALB/cJ ENSMUSG00180046092
 pseudogene Chr7:92075952-92078363 (-)
C3H/HeJ ENSMUSG00175052594
 pseudogene Chr7:92719018-92721429 (-)
C57BL/6NJ ENSMUSG00215051890
 pseudogene Chr7:92025884-92028286 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005053280
 pseudogene Chr7:95353854-95356307 (-)
CBA/J ENSMUSG00210048467
 pseudogene Chr7:92544539-92546950 (-)
DBA/2J ENSMUSG00185057196
 pseudogene Chr7:96896917-96899328 (-)
FVB/NJ ENSMUSG00205049234
 pseudogene Chr7:92530637-92533048 (-)
JF1/MsJ ENSUMUG00000050954
 pseudogene Chr7:102024443-102026844 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190046915
 pseudogene Chr7:92891418-92893809 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010050841
 pseudogene Chr7:91108042-91110433 (-)
SPRET/EiJ ENSMSPG00010044295
 pseudogene Chr7:92163302-92165874 (-)
WSB/EiJ ENSIUOG00005049966
 pseudogene Chr7:93143064-93145475 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Trim30e-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073929 Ensembl Gene Model | MGI Sequence Detail 1244 C57BL/6J ±  kb
transcript ENSMUST00000151294 Ensembl | MGI Sequence Detail 731 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:3643754
References
more
  • Summaries
    All 18
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:162981 Tareen SU, et al., An expanded clade of rodent Trim5 genes. Virology. 2009 Mar 15;385(2):473-83
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory