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Trgj1 Gene Detail
Summary
  • Symbol
    Trgj1
  • Name
    T cell receptor gamma joining 1
  • Synonyms
    Gm17003
  • Feature Type
    gene segment
  • IDs
    MGI:4440480
    NCBI Gene: 100126431
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:19394513-19394572 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 6.89 cM
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4440480
 gene segment Chr13:19394513-19394572 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002430
 gene segment Chr13:16326175-16326234 (+)
A/J MGP_AJ_G0002403
 gene segment Chr13:16102264-16102323 (+)
AKR/J MGP_AKRJ_G0002389
 gene segment Chr13:16304602-16304661 (+)
BALB/cJ MGP_BALBcJ_G0002397
 gene segment Chr13:16069817-16069876 (+)
C3H/HeJ MGP_C3HHeJ_G0002376
 gene segment Chr13:16430792-16430851 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002525
 gene segment Chr13:17020363-17020422 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0002368
 gene segment Chr13:17596403-17596462 (+)
DBA/2J MGP_DBA2J_G0002373
 gene segment Chr13:15685695-15685754 (+)
FVB/NJ MGP_FVBNJ_G0002386
 gene segment Chr13:15368896-15368955 (+)
LP/J MGP_LPJ_G0002428
 gene segment Chr13:16610055-16610114 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002357
 gene segment Chr13:18061900-18061959 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002519
 gene segment Chr13:16117647-16117706 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100126431 NCBI Gene Model | MGI Sequence Detail 60 C57BL/6J ±  kb
polypeptide A0A0G2JGW7 UniProt | EBI | MGI Sequence Detail 20 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:91304 Xiong N, et al., Positive selection of dendritic epidermal gammadelta T cell precursors in the fetal thymus determines expression of skin-homing receptors. Immunity. 2004 Jul;21(1):121-31
  • Latest
    J:153581 Uche UN, et al., Recombination signal sequence-associated restriction on TCRdelta gene rearrangement affects the development of tissue-specific gammadelta T cells. J Immunol. 2009 Oct 15;183(8):4931-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory