Gm16876 Gene Detail

Summary

• Symbol
  Gm16876
• Name
  predicted gene, 16876

• Feature Type
  lncRNA gene
• IDs
  MGI:4439800
  NCBI Gene: 102638151
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:91651439-91660364 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 45.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439800	lncRNA gene	Chr12:91645229-91660364 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003155	antisense lncRNA gene	Chr12:92811480-92820436 (+)
A/J	MGP_AJ_G0003132	antisense lncRNA gene	Chr12:89319550-89328578 (+)
AKR/J	MGP_AKRJ_G0003112	antisense lncRNA gene	Chr12:91726973-91735860 (+)
BALB/cJ	MGP_BALBcJ_G0003119	antisense lncRNA gene	Chr12:89608107-89617022 (+)
C3H/HeJ	MGP_C3HHeJ_G0003075	antisense lncRNA gene	Chr12:92330857-92339763 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003262	antisense lncRNA gene	Chr12:95557014-95566498 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002795	antisense lncRNA gene	Chr12:86756764-86765329 (+)
CAST/EiJ	MGP_CASTEiJ_G0003044	antisense lncRNA gene	Chr12:87249979-87258966 (+)
CBA/J	MGP_CBAJ_G0003072	antisense lncRNA gene	Chr12:99132397-99143039 (+)
DBA/2J	MGP_DBA2J_G0003077	antisense lncRNA gene	Chr12:88789408-88798367 (+)
FVB/NJ	MGP_FVBNJ_G0003097	antisense lncRNA gene	Chr12:87663569-87672715 (+)
LP/J	MGP_LPJ_G0003152	antisense lncRNA gene	Chr12:92602669-92611584 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003086	antisense lncRNA gene	Chr12:101895273-101904189 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003266	antisense lncRNA gene	Chr12:91329891-91339127 (+)
PWK/PhJ	MGP_PWKPhJ_G0003002	antisense lncRNA gene	Chr12:83382026-83391247 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002946	antisense lncRNA gene	Chr12:85473655-85482569 (+)
WSB/EiJ	MGP_WSBEiJ_G0003075	antisense lncRNA gene	Chr12:92091768-92101867 (+)

Homology

• Gene Tree
  Gm16876
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  2
• Genomic Mutations
  1 involving Gm16876
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000086689 (Evidence)
• NCBI Gene
  102638151

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086689	Ensembl Gene Model | MGI Sequence Detail	8926	C57BL/6J
transcript	ENSMUST00000151945	Ensembl | MGI Sequence Detail	760	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14