Gm16876 Gene Detail

Summary

• Symbol
  Gm16876
• Name
  predicted gene, 16876

• Feature Type
  lncRNA gene
• IDs
  MGI:4439800
  NCBI Gene: 102638151
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:91645229-91656462 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 45.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  537 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439800	lncRNA gene	Chr12:91633778-91660364 (+)
129S1/SvImJ	ENSMUSG00200017803	lncRNA gene	Chr12:83438433-83447361 (+)
A/J	ENSMUSG00195036271	lncRNA gene	Chr12:86054751-86063678 (+)
AKR/J	ENSMUSG00220018111	lncRNA gene	Chr12:83766148-83775075 (+)
BALB/cJ	ENSMUSG00180015639	lncRNA gene	Chr12:85127316-85136249 (+)
C3H/HeJ	ENSMUSG00175038481	lncRNA gene	Chr12:87825957-87834868 (+)
C57BL/6NJ	ENSMUSG00215018316	lncRNA gene	Chr12:84414236-84423166 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002795	antisense lncRNA gene	Chr12:86756764-86765329 (+)
CAST/EiJ	ENSTCUG00005006398	lncRNA gene	Chr12:84204497-84213482 (+)
CBA/J	ENSMUSG00210018889	lncRNA gene	Chr12:84799854-84808779 (+)
DBA/2J	ENSMUSG00185003024	lncRNA gene	Chr12:86647136-86656063 (+)
FVB/NJ	ENSMUSG00205000774	lncRNA gene	Chr12:84018675-84027618 (+)
JF1/MsJ	ENSUMUG00000025224	lncRNA gene	Chr12:91321475-91330428 (+)
LP/J	ENSMUSG00230005062	lncRNA gene	Chr12:93709574-93718500 (+)
NOD/ShiLtJ	ENSMUSG00190005412	lncRNA gene	Chr12:101319305-101328260 (-)
NZO/HlLtJ	ENSMUSG00225034211	lncRNA gene	Chr12:95477943-95486868 (+)
PWK/PhJ	ENSLUMG00010003486	lncRNA gene	Chr12:84794686-84803695 (+)
SPRET/EiJ	ENSMSPG00010001223	lncRNA gene	Chr12:87128807-87137750 (+)
WSB/EiJ	ENSIUOG00005002237	lncRNA gene	Chr12:83802895-83811850 (+)

Homology

• Gene Tree
  Gm16876
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  2
• Genomic Mutations
  1 involving Gm16876
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000086689 (Evidence)
• NCBI Gene
  102638151

Representative Sequences			Length	Strain/Species
genomic	102638151	NCBI Gene Model | MGI Sequence Detail	11234	C57BL/6J
transcript	AK040110	GenBank | ENA | DDBJ | MGI Sequence Detail	759	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14