Gm16853 Gene Detail

Summary

• Symbol
  Gm16853
• Name
  predicted gene, 16853

• Feature Type
  lncRNA gene
• IDs
  MGI:4439777
  NCBI Gene: 330902
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:21316538-21323016 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 7.79 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  255 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439777	lncRNA gene	Chr9:21316537-21323824 (-)
129S1/SvImJ	ENSMUSG00200050467	lncRNA gene	Chr9:18270814-18277292 (-)
A/J	ENSMUSG00195040709	lncRNA gene	Chr9:18107369-18113847 (-)
AKR/J	ENSMUSG00220036650	lncRNA gene	Chr9:18109812-18116290 (-)
BALB/cJ	ENSMUSG00180043826	lncRNA gene	Chr9:18241633-18248111 (-)
C3H/HeJ	ENSMUSG00175045238	lncRNA gene	Chr9:18204240-18210718 (-)
C57BL/6NJ	ENSMUSG00215037981	lncRNA gene	Chr9:18201501-18207979 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006744	lincRNA gene	Chr9:17420264-17426748 (-)
CAST/EiJ	ENSTCUG00005035543	lncRNA gene	Chr9:18246926-18253427 (-)
CBA/J	ENSMUSG00210045738	lncRNA gene	Chr9:18185160-18191638 (-)
DBA/2J	ENSMUSG00185027460	lncRNA gene	Chr9:18300465-18306943 (-)
FVB/NJ	ENSMUSG00205045749	lncRNA gene	Chr9:18531347-18537832 (-)
JF1/MsJ	ENSUMUG00000051410	lncRNA gene	Chr9:18409885-18416144 (-)
LP/J	ENSMUSG00230044764	lncRNA gene	Chr9:18689350-18695835 (-)
NOD/ShiLtJ	ENSMUSG00190043548	lncRNA gene	Chr9:18223141-18229626 (-)
NZO/HlLtJ	ENSMUSG00225051400	lncRNA gene	Chr9:18642500-18648978 (-)
PWK/PhJ	ENSLUMG00010047595	lncRNA gene	Chr9:18299972-18306235 (-)
SPRET/EiJ	ENSMSPG00010026390	lncRNA gene	Chr9:18531087-18537443 (-)
WSB/EiJ	ENSIUOG00005045964	lncRNA gene	Chr9:17768361-17774846 (-)

Homology

• Gene Tree
  Gm16853
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000097665 (Evidence)
• NCBI Gene
  330902

Representative Sequences			Length	Strain/Species
genomic	330902	NCBI Gene Model | MGI Sequence Detail	6479	C57BL/6J
transcript	NR_045742	RefSeq | MGI Sequence Detail	1986	C57BL/6

Molecular
Reagents

• All nucleic 4

  Genomic 1

  cDNA 3

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm16853:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr88400	Chr9:21323537-21323542 (-)	-524 bp