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Igkv1-35 Gene Detail
Summary
  • Symbol
    Igkv1-35
  • Name
    immunoglobulin kappa variable 1-35
  • Synonyms
    Gm16688
  • Feature Type
    gene segment
  • IDs
    MGI:4439612
    NCBI Gene: 620105
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:69987933-69988657 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 6, 31.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439612
gene segment Chr6:69987933-69988657 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000162
gene segment Chr6:70362296-70363020 (-)
A/J MGP_AJ_G0000144
gene segment Chr6:67572324-67573048 (-)
AKR/J MGP_AKRJ_G0000143
gene segment Chr6:69528053-69528777 (-)
BALB/cJ MGP_BALBcJ_G0000137
gene segment Chr6:67719541-67720265 (-)
C3H/HeJ MGP_C3HHeJ_G0000112
gene segment Chr6:114697933-114698657 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000201
gene segment Chr6:72129879-72130603 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000077
gene segment Chr6:67134961-67135685 (-)
CAST/EiJ MGP_CASTEiJ_G0000149
gene segment Chr6:69481389-69482113 (-)
CBA/J MGP_CBAJ_G0000143
gene segment Chr6:74991499-74992223 (-)
DBA/2J MGP_DBA2J_G0000137
gene segment Chr6:67012105-67012829 (-)
FVB/NJ MGP_FVBNJ_G0000135
gene segment Chr6:66442548-66443272 (-)
LP/J MGP_LPJ_G0000166
gene segment Chr6:70213751-70214475 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000147
gene segment Chr6:78708137-78708861 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000183
gene segment Chr6:69463956-69464680 (-)
PWK/PhJ MGP_PWKPhJ_G0000124
gene segment Chr6:66065874-66066598 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000102
gene segment Chr6:68335931-68336656 (-)
WSB/EiJ MGP_WSBEiJ_G0000142
gene segment Chr6:69748864-69749589 (-)



Homology
more
  • Human Ortholog
    IGKV2-24, immunoglobulin kappa variable 2-24
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IGKV2-24, immunoglobulin kappa variable 2-24
  • Synonyms
    A23, IGKV224
  • Links
    NCBI Gene ID: 28923
    UniProt: A0A0C4DH68

  • Chr Location
    2p11.2; chr2:89176328-89177160 (-)  GRCh38

  • Human Ortholog
    IGKV2-30, immunoglobulin kappa variable 2-30
  • Synonyms
    A17, IGKV230
  • Links
    NCBI Gene ID: 28919
    UniProt: P06310

  • Chr Location
    2p11.2; chr2:89244781-89245596 (-)  GRCh38

  • Human Ortholog
    IGKV2D-24, immunoglobulin kappa variable 2D-24 (non-functional)
  • Synonyms
    A7, IGKV2D24
  • Links
    NCBI Gene ID: 28885
    UniProt: A0A075B6R9

  • Chr Location
    2p11.2; chr2:90004797-90005629 (+)  GRCh38

  • Human Ortholog
    IGKV2D-30, immunoglobulin kappa variable 2D-30
  • Synonyms
    A1, IGKV2D30
  • Links
    NCBI Gene ID: 28881
    UniProt: A0A075B6S6

  • Chr Location
    2p11.2; chr2:89936859-89937679 (+)  GRCh38

Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 620105 NCBI Gene Model | MGI Sequence Detail 725 C57BL/6J ±  kb
polypeptide A0A0G2JDE5 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR050150 Immunoglobulin Variable Light Chain
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 5
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory