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Trbj1-5 Gene Detail
Summary
  • Symbol
    Trbj1-5
  • Name
    T cell receptor beta joining 1-5
  • Synonyms
    Gm16642
Location &
Maps
more
  • Sequence Map
    Chr6:41512018-41512067 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 19.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439566
 gene segment Chr6:41512018-41512067 (+)
129S1/SvImJ ENSMUSG00200048138
 gene segment Chr6:38569921-38569970 (+)
A/J ENSMUSG00195043051
 gene segment Chr6:38539613-38539662 (+)
AKR/J ENSMUSG00220009885
 gene segment Chr6:38140406-38140455 (+)
BALB/cJ ENSMUSG00180048165
 gene segment Chr6:38667994-38668043 (+)
C3H/HeJ ENSMUSG00175050881
 gene segment Chr6:38495109-38495158 (+)
C57BL/6NJ ENSMUSG00215049385
 gene segment Chr6:38593783-38593832 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002183
 gene segment Chr6:36076195-36076244 (+)
CAST/EiJ ENSTCUG00005037341
 gene segment Chr6:38000121-38000170 (+)
CBA/J ENSMUSG00210052249
 gene segment Chr6:38546871-38546920 (+)
DBA/2J ENSMUSG00185049159
 gene segment Chr6:38649364-38649413 (+)
FVB/NJ ENSMUSG00205050629
 gene segment Chr6:38448994-38449043 (+)
JF1/MsJ ENSUMUG00000027918
 gene segment Chr6:38193143-38193192 (+)
LP/J ENSMUSG00230043255
 gene segment Chr6:39573043-39573092 (+)
NOD/ShiLtJ ENSMUSG00190050742
 gene segment Chr6:38438823-38438872 (+)
NZO/HlLtJ ENSMUSG00225019977
 gene segment Chr6:41555679-41555728 (+)
PWK/PhJ ENSLUMG00010048370
 gene segment Chr6:38024442-38024491 (+)
SPRET/EiJ ENSMSPG00010035300
 gene segment Chr6:38746056-38746105 (+)
WSB/EiJ ENSIUOG00005035618
 gene segment Chr6:38702016-38702065 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100125252 NCBI Gene Model | MGI Sequence Detail 50 C57BL/6J ±  kb
polypeptide A0A0A6YX16 UniProt | EBI | MGI Sequence Detail 17 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 7
  • Earliest
    J:7518 Gascoigne NR, et al., Genomic organization and sequence of T-cell receptor beta-chain constant- and joining-region genes. Nature. 1984 Aug 2-8;310(5976):387-91
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory