About   Help   FAQ
Gm16638 Gene Detail
Summary
  • Symbol
    Gm16638
  • Name
    predicted gene, 16638
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4439562
    NCBI Gene: 102631889
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:83246256-83281049 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 47.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    287 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439562
 lncRNA gene Chr7:83246169-83281088 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004476
 antisense lncRNA gene Chr7:85757556-85795356 (-)
A/J MGP_AJ_G0004456
 antisense lncRNA gene Chr7:83686326-83721109 (-)
AKR/J MGP_AKRJ_G0004439
 antisense lncRNA gene Chr7:85610200-85644968 (-)
BALB/cJ MGP_BALBcJ_G0004441
 antisense lncRNA gene Chr7:83362861-83397613 (-)
C3H/HeJ MGP_C3HHeJ_G0004390
 antisense lncRNA gene Chr7:86160532-86196192 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004592
 antisense lncRNA gene Chr7:89077949-89113757 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004046
 antisense lncRNA gene Chr7:86062611-86097799 (-)
CAST/EiJ MGP_CASTEiJ_G0004350
 antisense lncRNA gene Chr7:77126279-77163106 (-)
CBA/J MGP_CBAJ_G0004385
 antisense lncRNA gene Chr7:92067884-92103109 (-)
DBA/2J MGP_DBA2J_G0004399
 antisense lncRNA gene Chr7:82190451-82225198 (-)
FVB/NJ MGP_FVBNJ_G0004416
 antisense lncRNA gene Chr7:82143884-82181594 (-)
LP/J MGP_LPJ_G0004480
 antisense lncRNA gene Chr7:87001228-87036003 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004406
 antisense lncRNA gene Chr7:92094549-92130696 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004590
 antisense lncRNA gene Chr7:85003410-85038167 (-)
PWK/PhJ MGP_PWKPhJ_G0004303
 antisense lncRNA gene Chr7:75423246-75458905 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004244
 antisense lncRNA gene Chr7:71997703-72032579 (-)
WSB/EiJ MGP_WSBEiJ_G0004389
 antisense lncRNA gene Chr7:85377182-85413470 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Gm16638
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102631889 NCBI Gene Model | MGI Sequence Detail 34794 C57BL/6J ±  kb
transcript NR_166696 RefSeq | MGI Sequence Detail 3797 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 15
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory