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n-R5s185 Gene Detail
Summary
  • Symbol
    n-R5s185
  • Name
    nuclear encoded rRNA 5S 185
Location &
Maps
more
  • Sequence Map
    Chr4:53860652-53860770 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 28.76 cM
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4422050
 rRNA gene Chr4:53860652-53860770 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036674
 rRNA gene Chr4:52522664-52522782 (+)
A/J MGP_AJ_G0036662
 rRNA gene Chr4:50495450-50495568 (+)
AKR/J MGP_AKRJ_G0036612
 rRNA gene Chr4:51886228-51886346 (+)
BALB/cJ MGP_BALBcJ_G0036652
 rRNA gene Chr4:50681293-50681411 (+)
C3H/HeJ MGP_C3HHeJ_G0036343
 rRNA gene Chr4:52419838-52419956 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037165
 rRNA gene Chr4:54443532-54443650 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034249
 rRNA gene Chr4:47439243-47439361 (+)
CAST/EiJ MGP_CASTEiJ_G0035530
 rRNA gene Chr4:52067339-52067457 (+)
CBA/J MGP_CBAJ_G0036316
 rRNA gene Chr4:56301036-56301154 (+)
DBA/2J MGP_DBA2J_G0036491
 rRNA gene Chr4:50471510-50471628 (+)
FVB/NJ MGP_FVBNJ_G0036447
 rRNA gene Chr4:49694811-49694929 (+)
LP/J MGP_LPJ_G0036538
 rRNA gene Chr4:52623736-52623854 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036445
 rRNA gene Chr4:59500598-59500716 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037280
 rRNA gene Chr4:52106143-52106261 (+)
PWK/PhJ MGP_PWKPhJ_G0035229
 rRNA gene Chr4:50410603-50410721 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035045
 rRNA gene Chr4:51388243-51388361 (+)
WSB/EiJ MGP_WSBEiJ_G0035733
 rRNA gene Chr4:52011133-52011251 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490001 NCBI Gene Model | MGI Sequence Detail 119 C57BL/6J ±  kb
transcript XR_004942283 RefSeq | MGI Sequence Detail 119 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:156847 Gardner PP, et al., Rfam: updates to the RNA families database. Nucleic Acids Res. 2009 Jan;37(Database issue):D136-40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory