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n-R5s41 Gene Detail
Summary
  • Symbol
    n-R5s41
  • Name
    nuclear encoded rRNA 5S 41
Location &
Maps
more
  • Sequence Map
    Chr15:82226854-82226972 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 38.56 cM
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4421886
 rRNA gene Chr15:82226854-82226972 (+)
129S1/SvImJ ENSMUSG00200054262
 rRNA gene Chr15:79341220-79341338 (+)
A/J ENSMUSG00195052039
 rRNA gene Chr15:79272872-79272990 (+)
AKR/J ENSMUSG00220053092
 rRNA gene Chr15:79316035-79316153 (+)
BALB/cJ ENSMUSG00180053900
 rRNA gene Chr15:79149815-79149933 (+)
C3H/HeJ ENSMUSG00175053419
 rRNA gene Chr15:79460775-79460893 (+)
C57BL/6NJ ENSMUSG00215053455
 rRNA gene Chr15:79244435-79244553 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034179
 rRNA gene Chr15:76349477-76349595 (+)
CAST/EiJ ENSTCUG00005049088
 rRNA gene Chr15:78766828-78766946 (+)
CBA/J ENSMUSG00210049565
 rRNA gene Chr15:79235875-79235993 (+)
DBA/2J ENSMUSG00185052041
 rRNA gene Chr15:79259050-79259168 (+)
FVB/NJ ENSMUSG00205052049
 rRNA gene Chr15:78995646-78995764 (+)
JF1/MsJ ENSUMUG00000056520
 rRNA gene Chr15:78840341-78840459 (+)
LP/J ENSMUSG00230045081
 rRNA gene Chr15:82581601-82581719 (+)
NOD/ShiLtJ ENSMUSG00190054024
 rRNA gene Chr15:79252973-79253091 (+)
NZO/HlLtJ ENSMUSG00225050611
 rRNA gene Chr15:82920154-82920272 (+)
PWK/PhJ ENSLUMG00010052411
 rRNA gene Chr15:79051195-79051313 (+)
SPRET/EiJ ENSMSPG00010051546
 rRNA gene Chr15:80692571-80692689 (+)
WSB/EiJ ENSIUOG00005050681
 rRNA gene Chr15:79337157-79337275 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic 115488539 NCBI Gene Model | MGI Sequence Detail 119 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 16
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory