Gm16575 Gene Detail

Summary

• Symbol
  Gm16575
• Name
  predicted gene 16575

• Feature Type
  lncRNA gene
• IDs
  MGI:4414995
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr15:79623494-79625999 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 37.85 cM

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4414995	lncRNA gene	Chr15:79623494-79625999 (+)
129S1/SvImJ	ENSMUSG00200053744	lncRNA gene	Chr15:76737029-76739253 (+)
A/J	ENSMUSG00195052457	lncRNA gene	Chr15:76679990-76682214 (+)
AKR/J	ENSMUSG00220053379	lncRNA gene	Chr15:76723405-76725629 (+)
BALB/cJ	ENSMUSG00180053341	lncRNA gene	Chr15:76556988-76559212 (+)
C3H/HeJ	ENSMUSG00175053407	lncRNA gene	Chr15:76868215-76870439 (+)
C57BL/6NJ	ENSMUSG00215053558	lncRNA gene	Chr15:76634209-76636433 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013439	unclassified non-coding RNA gene	Chr15:73746097-73748514 (+)
CAST/EiJ	ENSTCUG00005049292	lncRNA gene	Chr15:76169152-76171379 (+)
CBA/J	ENSMUSG00210049481	lncRNA gene	Chr15:76643361-76645585 (+)
DBA/2J	ENSMUSG00185052426	lncRNA gene	Chr15:76653212-76655436 (+)
FVB/NJ	ENSMUSG00205052777	lncRNA gene	Chr15:76380558-76382782 (+)
JF1/MsJ	ENSUMUG00000056211	lncRNA gene	Chr15:76223141-76225353 (+)
LP/J	ENSMUSG00230052618	lncRNA gene	Chr15:79985460-79987684 (+)
NOD/ShiLtJ	ENSMUSG00190053832	lncRNA gene	Chr15:76662917-76665141 (+)
NZO/HlLtJ	ENSMUSG00225053872	lncRNA gene	Chr15:80308472-80310685 (+)
PWK/PhJ	ENSLUMG00010052200	lncRNA gene	Chr15:76446487-76448705 (+)
SPRET/EiJ	ENSMSPG00010050533	lncRNA gene	Chr15:78111098-78113320 (+)
WSB/EiJ	ENSIUOG00005050699	lncRNA gene	Chr15:76712832-76715045 (+)

Homology

• Gene Tree
  Gm16575
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  18 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm16575
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000089796 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089796	Ensembl Gene Model | MGI Sequence Detail	2506	C57BL/6J
transcript	ENSMUST00000162186	Ensembl | MGI Sequence Detail	1896	Not Applicable

References

• Summaries
  All 21

  Phenotypes 18
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm16575:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132116	Chr15:79623741-79623759 (+)	256 bp
Tssr132117	Chr15:79623775-79623795 (+)	291 bp
Tssr132118	Chr15:79623797-79623811 (+)	310 bp
Tssr4656	Chr15:79623832-79623841 (+)	343 bp