About   Help   FAQ
Gm16553 Gene Detail
Summary
  • Symbol
    Gm16553
  • Name
    predicted gene 16553
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4414973
    NCBI Gene: 102632602
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:3759804-3789044 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 1.92 cM
Strain
Comparison
more
  • SNPs within 2kb
    194 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4414973
 lncRNA gene Chr8:3759484-3789993 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004532
 antisense lncRNA gene Chr8:661810-696309 (+)
A/J MGP_AJ_G0004512
 antisense lncRNA gene Chr8:626075-660385 (+)
AKR/J MGP_AKRJ_G0004495
 antisense lncRNA gene Chr8:657089-689734 (+)
BALB/cJ MGP_BALBcJ_G0004497
 antisense lncRNA gene Chr8:652304-681717 (+)
C3H/HeJ MGP_C3HHeJ_G0004446
 antisense lncRNA gene Chr8:672340-701949 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004647
 antisense lncRNA gene Chr8:705675-737535 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004101
 antisense lncRNA gene Chr8:578649-609035 (+)
CAST/EiJ MGP_CASTEiJ_G0004406
 antisense lncRNA gene Chr8:666789-697851 (+)
CBA/J MGP_CBAJ_G0004441
 antisense lncRNA gene Chr8:729277-763319 (+)
DBA/2J MGP_DBA2J_G0004455
 antisense lncRNA gene Chr8:597087-626795 (+)
FVB/NJ MGP_FVBNJ_G0004472
 antisense lncRNA gene Chr8:644848-675700 (+)
LP/J MGP_LPJ_G0004536
 antisense lncRNA gene Chr8:639368-668571 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004461
 antisense lncRNA gene Chr8:697136-740267 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004646
 antisense lncRNA gene Chr8:651143-680760 (+)
PWK/PhJ MGP_PWKPhJ_G0004359
 antisense lncRNA gene Chr8:626470-656153 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004300
 antisense lncRNA gene Chr8:648671-683596 (+)
WSB/EiJ MGP_WSBEiJ_G0004445
 antisense lncRNA gene Chr8:646884-677839 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000089956 Ensembl Gene Model | MGI Sequence Detail 29241 C57BL/6J ±  kb
transcript ENSMUST00000160490 Ensembl | MGI Sequence Detail 716 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory