Hmgb3-ps Pseudogene Detail

Summary

• Symbol
  Hmgb3-ps
• Name
  Hmgb3 retrotransposed pseudogene
• Synonyms
  Gm16543

• Feature Type
  pseudogene
• IDs
  MGI:4414963
  NCBI Gene: 100417024
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:12606119-12606695 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 5.77 cM

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4414963	pseudogene	Chr14:12606071-12606695 (-)
129S1/SvImJ	ENSMUSG00200025252	pseudogene	Chr14:9285058-9285658 (-)
A/J	ENSMUSG00195030399	pseudogene	Chr14:10113615-10114215 (-)
AKR/J	ENSMUSG00220024044	pseudogene	Chr14:9262121-9262721 (-)
BALB/cJ	ENSMUSG00180024289	pseudogene	Chr14:9405351-9405951 (-)
C3H/HeJ	ENSMUSG00175009684	pseudogene	Chr14:9452307-9452907 (-)
C57BL/6NJ	ENSMUSG00215022794	pseudogene	Chr14:9653497-9654097 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009915	pseudogene	Chr14:3010545-3011344 (+)
CAST/EiJ	ENSTCUG00005031239	pseudogene	Chr14:9313593-9314193 (-)
CBA/J	ENSMUSG00210036758	pseudogene	Chr14:9672883-9673483 (-)
DBA/2J	ENSMUSG00185038463	pseudogene	Chr14:9681361-9681961 (-)
FVB/NJ	ENSMUSG00205024878	pseudogene	Chr14:9610686-9611286 (-)
JF1/MsJ	ENSUMUG00000028069	pseudogene	Chr14:9677716-9678316 (-)
LP/J	ENSMUSG00230007105	pseudogene	Chr14:10784554-10785154 (-)
NOD/ShiLtJ	ENSMUSG00190032856	pseudogene	Chr14:9690144-9690744 (-)
NZO/HlLtJ	ENSMUSG00225037563	pseudogene	Chr14:10073631-10074231 (-)
PWK/PhJ	ENSLUMG00010032336	pseudogene	Chr14:30973944-30974544 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005025359	pseudogene	Chr14:9519188-9519788 (-)

Homology

• Gene Tree
  Hmgb3-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089795 (Evidence)
• NCBI Gene
  100417024

Representative Sequences			Length	Strain/Species
genomic	100417024	NCBI Gene Model | MGI Sequence Detail	577	C57BL/6J

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;