Gm16519 Pseudogene Detail

Summary

• Symbol
  Gm16519
• Name
  predicted gene, 16519

• Feature Type
  pseudogene
• IDs
  MGI:4360871
  NCBI Gene: 546695
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:71236053-71236541 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 41.87 cM

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4360871	pseudogene	Chr17:71236003-71236585 (+)
129S1/SvImJ	ENSMUSG00200039518	pseudogene	Chr17:66569530-66570021 (+)
A/J	ENSMUSG00195018910	pseudogene	Chr17:67914432-67914923 (+)
AKR/J	ENSMUSG00220018557	pseudogene	Chr17:66949308-66949799 (+)
BALB/cJ	ENSMUSG00180020721	pseudogene	Chr17:67650635-67651126 (+)
C3H/HeJ	ENSMUSG00175031637	pseudogene	Chr17:66963795-66964286 (+)
C57BL/6NJ	ENSMUSG00215029269	pseudogene	Chr17:66652121-66652609 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027068	pseudogene	Chr17:67520931-67521419 (+)
CBA/J	ENSMUSG00210030404	pseudogene	Chr17:66775846-66776337 (+)
DBA/2J	ENSMUSG00185023300	pseudogene	Chr17:69608924-69609415 (+)
FVB/NJ	ENSMUSG00205019562	pseudogene	Chr17:67423446-67423937 (+)
JF1/MsJ	ENSUMUG00000038490	pseudogene	Chr17:69265377-69265865 (+)
LP/J	ENSMUSG00230017367	pseudogene	Chr17:70574896-70575387 (+)
NOD/ShiLtJ	ENSMUSG00190037155	pseudogene	Chr17:66712333-66712824 (+)
NZO/HlLtJ	ENSMUSG00225029165	pseudogene	Chr17:72848242-72848733 (+)
PWK/PhJ	ENSLUMG00010030751	pseudogene	Chr17:66487947-66488435 (+)
SPRET/EiJ	ENSMSPG00010017461	pseudogene	Chr17:66865615-66866095 (+)
WSB/EiJ	ENSIUOG00005032670	pseudogene	Chr17:67625833-67626324 (+)

Homology

• Gene Tree
  Gm16519
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000066983 (Evidence)
• NCBI Gene
  546695

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066983	Ensembl Gene Model | MGI Sequence Detail	489	C57BL/6J
transcript	ENSMUST00000092011	Ensembl | MGI Sequence Detail	489	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm16519:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr145706	Chr17:71236001-71236002 (+)	-51 bp