Igf1os Gene Detail

Summary

• Symbol
  Igf1os
• Name
  insulin-like growth factor 1, opposite strand
• Synonyms
  Gm10055, Gm16176

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3841250
  NCBI Gene: 627270
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr10:87662618-87699255 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 43.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  953 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3841250	antisense lncRNA gene	Chr10:87553086-87699255 (-)
129S1/SvImJ	ENSMUSG00200031584	lncRNA gene	Chr10:84159588-84196586 (-)
A/J	ENSMUSG00195023581	lncRNA gene	Chr10:84612106-84649109 (-)
AKR/J	ENSMUSG00220022805	lncRNA gene	Chr10:84218605-84255607 (-)
BALB/cJ	ENSMUSG00180033130	lncRNA gene	Chr10:84615152-84652144 (-)
C3H/HeJ	ENSMUSG00175024276	lncRNA gene	Chr10:84505652-84542645 (-)
C57BL/6NJ	ENSMUSG00215031618	lncRNA gene	Chr10:84154405-84191414 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002542	antisense lncRNA gene	Chr10:81675524-81710438 (-)
CAST/EiJ	ENSTCUG00005036380	lncRNA gene	Chr10:83882755-83922517 (-)
CBA/J	ENSMUSG00210034877	lncRNA gene	Chr10:84346098-84383091 (-)
DBA/2J	ENSMUSG00185044514	lncRNA gene	Chr10:84570582-84607577 (-)
FVB/NJ	ENSMUSG00205019200	lncRNA gene	Chr10:84196277-84236069 (-)
JF1/MsJ	ENSUMUG00000027794	lncRNA gene	Chr10:85905413-85945244 (-)
LP/J	ENSMUSG00230018303	lncRNA gene	Chr10:86442154-86479152 (-)
NOD/ShiLtJ	ENSMUSG00190018949	lncRNA gene	Chr10:84597414-84634410 (-)
NZO/HlLtJ	ENSMUSG00225053609	lncRNA gene	Chr10:90720719-90757721 (-)
PWK/PhJ	ENSLUMG00010023605	lncRNA gene	Chr10:84193309-84233137 (-)
SPRET/EiJ	ENSMSPG00010033877	lncRNA gene	Chr10:85676294-85715412 (-)
WSB/EiJ	ENSIUOG00005039590	lncRNA gene	Chr10:84268889-84305892 (-)

Homology

• Gene Tree
  Igf1os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Igf1os
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  55
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000058934 (Evidence)
• NCBI Gene
  627270

Representative Sequences			Length	Strain/Species
genomic	627270	NCBI Gene Model | MGI Sequence Detail	36638	C57BL/6J
transcript	AK051435	GenBank | ENA | DDBJ | MGI Sequence Detail	2595	C57BL/6J
polypeptide	Q8R031	UniProt | EBI | MGI Sequence Detail	78	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:3642077

References

• Summaries
  All 16

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Igf1os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr98815	Chr10:87696217-87696227 (-)	3,033 bp
Tssr98814	Chr10:87696062-87696064 (-)	3,192 bp