Gm16364 MGI Mouse Gene Detail - MGI:3840142

Symbol

Gm16364
Name

predicted gene 16364
Synonyms

Gm16365, Hilnc

Feature Type

lncRNA gene
IDs

MGI:3840142
NCBI Gene: 100504626
Alliance

genome feature page
Transcription Start Sites

1 TSS

Sequence Map

Chr10:39432067-39489678 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 10, 20.78 cM

SNPs within 2kb

1792 from dbSNP Build 142
Strain Annotations

37

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3840142	lncRNA gene	Chr10:39432067-39489916 (-)
129S1/SvImJ	ENSMUSG00200010009	lncRNA gene	Chr10:36287267-36289260 (-)
129S1/SvImJ	ENSMUSG00200009603	lncRNA gene	Chr10:36289694-36344884 (-)
A/J	ENSMUSG00195018040	lncRNA gene	Chr10:36592340-36647545 (-)
A/J	ENSMUSG00195017369	lncRNA gene	Chr10:36589912-36591906 (-)
AKR/J	ENSMUSG00220029187	lncRNA gene	Chr10:36269010-36324208 (-)
AKR/J	ENSMUSG00220029869	lncRNA gene	Chr10:36266582-36268576 (-)
BALB/cJ	ENSMUSG00180017273	lncRNA gene	Chr10:36675188-36677186 (-)
BALB/cJ	ENSMUSG00180017056	lncRNA gene	Chr10:36677620-36732820 (-)
C3H/HeJ	ENSMUSG00175012102	lncRNA gene	Chr10:36472002-36527193 (-)
C3H/HeJ	ENSMUSG00175012727	lncRNA gene	Chr10:36469572-36471568 (-)
C57BL/6NJ	ENSMUSG00215009918	lncRNA gene	Chr10:36220070-36222067 (-)
C57BL/6NJ	ENSMUSG00215011138	lncRNA gene	Chr10:36222501-36277695 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002499	antisense lncRNA gene	Chr10:35046155-35100999 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002498	antisense lncRNA gene	Chr10:35043689-35045723 (-)
CAST/EiJ	ENSTCUG00005029359	lncRNA gene	Chr10:36674372-36676350 (-)
CAST/EiJ	ENSTCUG00005030087	lncRNA gene	Chr10:36676784-36731737 (-)
CBA/J	ENSMUSG00210026155	lncRNA gene	Chr10:36363040-36365033 (-)
CBA/J	ENSMUSG00210026108	lncRNA gene	Chr10:36365467-36420643 (-)
DBA/2J	ENSMUSG00185008690	lncRNA gene	Chr10:36515615-36517609 (-)
DBA/2J	ENSMUSG00185007646	lncRNA gene	Chr10:36518043-36573225 (-)
FVB/NJ	ENSMUSG00205013967	lncRNA gene	Chr10:36430189-36432180 (-)
FVB/NJ	ENSMUSG00205015146	lncRNA gene	Chr10:36432614-36487808 (-)
JF1/MsJ	ENSUMUG00000035827	lncRNA gene	Chr10:36280650-36282608 (-)
JF1/MsJ	ENSUMUG00000035509	lncRNA gene	Chr10:36283044-36339207 (-)
LP/J	ENSMUSG00230016388	lncRNA gene	Chr10:38278752-38333937 (-)
LP/J	ENSMUSG00230016467	lncRNA gene	Chr10:38276326-38278318 (-)
NOD/ShiLtJ	ENSMUSG00190033458	lncRNA gene	Chr10:36646364-36701546 (-)
NOD/ShiLtJ	ENSMUSG00190035378	lncRNA gene	Chr10:36643934-36645930 (-)
NZO/HlLtJ	ENSMUSG00225018051	lncRNA gene	Chr10:42603182-42605176 (-)
NZO/HlLtJ	ENSMUSG00225017962	lncRNA gene	Chr10:42605610-42660795 (-)
PWK/PhJ	ENSLUMG00010007957	lncRNA gene	Chr10:36401606-36403565 (-)
PWK/PhJ	ENSLUMG00010008344	lncRNA gene	Chr10:36404001-36459752 (-)
SPRET/EiJ	ENSMSPG00010020862	lncRNA gene	Chr10:37437259-37493564 (-)
SPRET/EiJ	ENSMSPG00010020535	lncRNA gene	Chr10:37434787-37436823 (-)
WSB/EiJ	ENSIUOG00005015302	lncRNA gene	Chr10:36184248-36241007 (-)
WSB/EiJ	ENSIUOG00005015402	lncRNA gene	Chr10:36181821-36183814 (-)

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Phenotype Summary

9 phenotypes from 2 alleles in 1 genetic background
10 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

10
Chemically induced (other)

1
Endonuclease-mediated

2
Gene trapped

4
Radiation induced

1
Targeted

2
Genomic Mutations

2 involving Gm16364
Find Mice (IMSR)

1 strains or lines available

Mice homozygous for a null allele exhibit decreased high-fat diet induced obesity and hepatic steatosis associated with decreased lipogenesis.

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All GO Annotations

6
GO References

1

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

Click cells to view annotations.

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cDNA Data

1

Other Mouse Links

GEO

Expression Atlas

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All Sequences

63
RefSeq

2

Ensembl

ENSMUSG00000086915 (Evidence), ENSMUSG00000087014 (Evidence)
NCBI Gene

100504626

Representative Sequences				Length	Strain/Species	Flank
	genomic	100504626	NCBI Gene Model \| MGI Sequence Detail	57612	C57BL/6J	± kb
	transcript	NR_152259	RefSeq \| MGI Sequence Detail	2133	ZRU/MplStud

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All nucleic 1

cDNA 1

Microarray probesets 1

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MGI:3840143

Summaries

All 21

Gene Ontology 1

Phenotypes 10
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:322340 Jiang Y, et al., Loss of Hilnc prevents diet-induced hepatic steatosis through binding of IGF2BP2. Nat Metab. 2021 Nov;3(11):1569-1584

TSS for Gm16364:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr97335	Chr10:39489631-39489682 (-)	21 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/15/2026 MGI 6.29