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Pate6 Gene Detail
Summary
  • Symbol
    Pate6
  • Name
    prostate and testis expressed 6
  • Synonyms
    9230110F15Rik, Anlp3, D730048I06Rik, mANLP2, Pate-A, Pate-C
Location &
Maps
more
  • Sequence Map
    Chr9:35699346-35701408 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.45 cM, cytoband A5.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3839961
 protein coding gene Chr9:35699346-35701408 (-)
129S1/SvImJ ENSMUSG00200037721
 protein coding gene Chr9:32678296-32680358 (-)
A/J ENSMUSG00195046681
 protein coding gene Chr9:32469737-32471799 (-)
AKR/J ENSMUSG00220045644
 protein coding gene Chr9:32513644-32515706 (-)
BALB/cJ ENSMUSG00180042785
 protein coding gene Chr9:32598042-32600104 (-)
C3H/HeJ ENSMUSG00175045607
 protein coding gene Chr9:32599239-32601301 (-)
C57BL/6NJ ENSMUSG00215027811
 protein coding gene Chr9:32599016-32601078 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031966
 protein coding gene Chr9:31401424-31403485 (-)
CAST/EiJ ENSTCUG00005043120
 protein coding gene Chr9:32563955-32566021 (-)
CBA/J ENSMUSG00210044220
 protein coding gene Chr9:32605529-32607589 (-)
DBA/2J ENSMUSG00185036502
 protein coding gene Chr9:32653607-32655669 (-)
FVB/NJ ENSMUSG00205032228
 protein coding gene Chr9:32960676-32962738 (-)
JF1/MsJ ENSUMUG00000039647
 protein coding gene Chr9:32827953-32830019 (-)
LP/J ENSMUSG00230029429
 protein coding gene Chr9:33078457-33080529 (-)
NOD/ShiLtJ ENSMUSG00190021165
 protein coding gene Chr9:32731102-32733164 (-)
NZO/HlLtJ ENSMUSG00225020762
 protein coding gene Chr9:33046528-33048600 (-)
PWK/PhJ ENSLUMG00010039155
 protein coding gene Chr9:32723257-32725333 (-)
SPRET/EiJ ENSMSPG00010032739
 protein coding gene Chr9:33192841-33194915 (-)
WSB/EiJ ENSIUOG00005041558
 protein coding gene Chr9:32208483-32210549 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68171 NCBI Gene Model | MGI Sequence Detail 2063 C57BL/6J ±  kb
transcript NM_026593 RefSeq | MGI Sequence Detail 1334 C57BL/6  
polypeptide NP_080869 RefSeq | MGI Sequence Detail 106 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR016054 Ly-6 antigen/uPA receptor-like
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
Other
Accession IDs
less
MGI:1915421
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory