Mir1950 Gene Detail

Summary

• Symbol
  Mir1950
• Name
  microRNA 1950
• Synonyms
  mmu-mir-1950

• Feature Type
  miRNA gene
• IDs
  MGI:3837023
  NCBI Gene: 100316775
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:34942796-34942869 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 29.79 cM

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3837023	miRNA gene	Chr19:34942796-34942869 (+)
129S1/SvImJ	ENSMUSG00200031292	miRNA gene	Chr19:31711646-31711719 (+)
A/J	ENSMUSG00195011710	miRNA gene	Chr19:31828997-31829070 (+)
AKR/J	ENSMUSG00220019404	miRNA gene	Chr19:31725894-31725967 (+)
BALB/cJ	ENSMUSG00180032629	miRNA gene	Chr19:32157823-32157896 (+)
C3H/HeJ	ENSMUSG00175042129	miRNA gene	Chr19:31579567-31579640 (+)
C57BL/6NJ	ENSMUSG00215033890	miRNA gene	Chr19:31606275-31606348 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007638	miRNA gene	Chr19:31526540-31526604 (+)
CAST/EiJ	ENSTCUG00005015981	miRNA gene	Chr19:31240696-31240769 (+)
CBA/J	ENSMUSG00210038901	miRNA gene	Chr19:31656900-31656973 (+)
DBA/2J	ENSMUSG00185034903	miRNA gene	Chr19:32187873-32187946 (+)
FVB/NJ	ENSMUSG00205007620	miRNA gene	Chr19:31406453-31406526 (+)
JF1/MsJ	ENSUMUG00000049344	miRNA gene	Chr19:32331147-32331220 (+)
LP/J	ENSMUSG00230036376	miRNA gene	Chr19:32998996-32999069 (+)
NOD/ShiLtJ	ENSMUSG00190012067	miRNA gene	Chr19:31557804-31557877 (+)
NZO/HlLtJ	ENSMUSG00225029600	miRNA gene	Chr19:36541081-36541154 (+)
PWK/PhJ	ENSLUMG00010001347	miRNA gene	Chr19:31701450-31701523 (+)
SPRET/EiJ	ENSMSPG00010023363	miRNA gene	Chr19:31365012-31365085 (+)
WSB/EiJ	ENSIUOG00005038925	miRNA gene	Chr19:31050225-31050298 (+)

Homology

• Gene Tree
  Mir1950
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Mir1950
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000089151 (Evidence)
• NCBI Gene
  100316775

Representative Sequences			Length	Strain/Species
genomic	100316775	NCBI Gene Model | MGI Sequence Detail	74	C57BL/6J
transcript	NR_035473	RefSeq | MGI Sequence Detail	74	ZRU/MplStud

Other Database
Links

miRBase

MI0009941

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:93237 Nobrega MA, et al., Megabase deletions of gene deserts result in viable mice. Nature. 2004 Oct 21;431(7011):988-93
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4