Mir1929 Gene Detail

Summary

• Symbol
  Mir1929
• Name
  microRNA 1929
• Synonyms
  mmu-mir-1929

• Feature Type
  miRNA gene
• IDs
  MGI:3836961
  NCBI Gene: 100316688
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:44235672-44235764 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 23.24 cM

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3836961	miRNA gene	Chr10:44235672-44235764 (+)
129S1/SvImJ	ENSMUSG00200007726	miRNA gene	Chr10:41134961-41135053 (+)
A/J	ENSMUSG00195003100	miRNA gene	Chr10:41403268-41403360 (+)
AKR/J	ENSMUSG00220006625	miRNA gene	Chr10:41089103-41089195 (+)
BALB/cJ	ENSMUSG00180012165	miRNA gene	Chr10:41492539-41492631 (+)
C3H/HeJ	ENSMUSG00175010724	miRNA gene	Chr10:41279961-41280053 (+)
C57BL/6NJ	ENSMUSG00215002441	miRNA gene	Chr10:41030006-41030098 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007014	miRNA gene	Chr10:39905736-39905828 (+)
CAST/EiJ	ENSTCUG00005008870	miRNA gene	Chr10:41475915-41476007 (+)
CBA/J	ENSMUSG00210008304	miRNA gene	Chr10:41175629-41175721 (+)
DBA/2J	ENSMUSG00185003370	miRNA gene	Chr10:41327180-41327272 (+)
FVB/NJ	ENSMUSG00205005205	miRNA gene	Chr10:41242596-41242688 (+)
JF1/MsJ	ENSUMUG00000028917	miRNA gene	Chr10:41154954-41155046 (+)
LP/J	ENSMUSG00230005953	miRNA gene	Chr10:43132979-43133071 (+)
NOD/ShiLtJ	ENSMUSG00190005689	miRNA gene	Chr10:41455382-41455474 (+)
NZO/HlLtJ	ENSMUSG00225018706	miRNA gene	Chr10:47417014-47417106 (+)
PWK/PhJ	ENSLUMG00010004832	miRNA gene	Chr10:41235655-41235747 (+)
SPRET/EiJ	ENSMSPG00010013566	miRNA gene	Chr10:42286995-42287087 (+)
WSB/EiJ	ENSIUOG00005014985	miRNA gene	Chr10:41007692-41007784 (+)

Homology

• Gene Tree
  Mir1929
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Mir1929
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000089260 (Evidence)
• NCBI Gene
  100316688

Representative Sequences			Length	Strain/Species
genomic	100316688	NCBI Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	NR_035450	RefSeq | MGI Sequence Detail	93	ZRU/MplStud

Other Database
Links

miRBase

MI0009918

References

• Summaries
  All 13

  Developmental Gene Expression 1

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:344845 Xie L, et al., Homocysteine induces podocyte apoptosis by regulating miR-1929-5p expression through c-Myc, DNMT1 and EZH2. Mol Oncol. 2021 Nov;15(11):3203-3221

TSS for Mir1929:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr93169	Chr10:44234388-44234394 (+)	-1,281 bp