Gm16302 Gene Detail

Summary

• Symbol
  Gm16302
• Name
  predicted gene 16302

• Feature Type
  lncRNA gene
• IDs
  MGI:3826572
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:14756909-14759131 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 4.38 cM

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826572	lncRNA gene	Chr9:14756909-14759131 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007403	lincRNA gene	Chr9:11807068-11809290 (+)
A/J	MGP_AJ_G0007399	lincRNA gene	Chr9:11751815-11754037 (+)
AKR/J	MGP_AKRJ_G0007371	lincRNA gene	Chr9:11758580-11760802 (+)
BALB/cJ	MGP_BALBcJ_G0007377	lincRNA gene	Chr9:11522486-11524708 (+)
C3H/HeJ	MGP_C3HHeJ_G0007321	lincRNA gene	Chr9:12057178-12059400 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007548	lincRNA gene	Chr9:12191206-12193428 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0007224	lincRNA gene	Chr9:11903428-11908596 (+)
CBA/J	MGP_CBAJ_G0007303	lincRNA gene	Chr9:12759853-12762155 (+)
DBA/2J	MGP_DBA2J_G0007326	lincRNA gene	Chr9:11625978-11628200 (+)
FVB/NJ	MGP_FVBNJ_G0007347	lincRNA gene	Chr9:11218170-11220392 (+)
LP/J	MGP_LPJ_G0007408	lincRNA gene	Chr9:11900367-11902469 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007324	lincRNA gene	Chr9:13795690-13797912 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007551	lincRNA gene	Chr9:11779859-11782081 (+)
PWK/PhJ	MGP_PWKPhJ_G0007165	lincRNA gene	Chr9:11697642-11701328 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007072	lincRNA gene	Chr9:11873274-11875272 (+)
WSB/EiJ	MGP_WSBEiJ_G0007284	lincRNA gene	Chr9:11627379-11629523 (+)

Homology

• Gene Tree
  Gm16302
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000090023 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090023	Ensembl Gene Model | MGI Sequence Detail	2223	C57BL/6J
transcript	ENSMUST00000159268	Ensembl | MGI Sequence Detail	428	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;