Gm16277 MGI Mouse Gene Detail - MGI:3826543

Sequence Map

Chr19:58192432-58225111 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3826543	lncRNA gene	Chr19:58192432-58225111 (+)
129S1/SvImJ	ENSMUSG00200015128	lncRNA gene	Chr19:54901833-54933968 (+)
A/J	ENSMUSG00195002646	lncRNA gene	Chr19:55076506-55108641 (+)
AKR/J	ENSMUSG00220018133	lncRNA gene	Chr19:54811198-54843249 (+)
BALB/cJ	ENSMUSG00180020026	lncRNA gene	Chr19:55300279-55332411 (+)
C3H/HeJ	ENSMUSG00175022944	lncRNA gene	Chr19:54838776-54870918 (+)
C57BL/6NJ	ENSMUSG00215026651	lncRNA gene	Chr19:54934800-54966854 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003106	antisense lncRNA gene	Chr19:54669525-54702534 (+)
CAST/EiJ	ENSTCUG00005015613	lncRNA gene	Chr19:54484478-54516424 (+)
CBA/J	ENSMUSG00210021463	lncRNA gene	Chr19:54918044-54950170 (+)
DBA/2J	ENSMUSG00185028416	lncRNA gene	Chr19:55416902-55449033 (+)
FVB/NJ	ENSMUSG00205003704	lncRNA gene	Chr19:54332366-54364500 (+)
JF1/MsJ	ENSUMUG00000040745	lncRNA gene	Chr19:55600175-55631681 (+)
LP/J	ENSMUSG00230027850	lncRNA gene	Chr19:56183215-56216495 (+)
NOD/ShiLtJ	ENSMUSG00190014126	lncRNA gene	Chr19:54865330-54897385 (+)
NZO/HlLtJ	ENSMUSG00225025435	lncRNA gene	Chr19:59795410-59827463 (+)
PWK/PhJ	ENSLUMG00010018710	lncRNA gene	Chr19:54669524-54701442 (+)
SPRET/EiJ	ENSMSPG00010003409	lncRNA gene	Chr19:54521537-54555084 (+)
WSB/EiJ	ENSIUOG00005025377	lncRNA gene	Chr19:54280341-54312376 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000087002	Ensembl Gene Model \| MGI Sequence Detail	32680	C57BL/6J	± kb
	transcript	ENSMUST00000381120	Ensembl \| MGI Sequence Detail	1640	Not Applicable

Summaries

All 6
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm16277:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157252	Chr19:58219535-58219544 (+)	27,108 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24