Gm4748 Pseudogene Detail

Summary

• Symbol
  Gm4748
• Name
  predicted gene 4748
• Synonyms
  Serf2-ps, small EDRK-rich factor 2 pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:3822518
  NCBI Gene: 20366
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:43656895-43663943 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 23.05 cM

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3822518	pseudogene	Chr4:43656895-43663943 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm4748
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  20366

Representative Sequences			Length	Strain/Species
genomic	20366	NCBI Gene Model | MGI Sequence Detail	7049	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:49574 Scharf JM, et al., Identification of a candidate modifying gene for spinal muscular atrophy by comparative genomics. Nat Genet. 1998 Sep;20(1):83-6

TSS for Gm4748:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41473	Chr4:43662010-43662021 (-)	1,927 bp
Tssr41472	Chr4:43661963-43662005 (-)	1,959 bp