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Snord96a Gene Detail
Summary
  • Symbol
    Snord96a
  • Name
    small nucleolar RNA, C/D box 96A
  • Synonyms
    U96, U96a, Z37
Location &
Maps
more
  • Sequence Map
    Chr11:48692860-48692936 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 28.77 cM
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3819568
 snoRNA gene Chr11:48692859-48692939 (+)
129S1/SvImJ ENSMUSG00200040342
 snoRNA gene Chr11:45748418-45748498 (+)
A/J ENSMUSG00195038023
 snoRNA gene Chr11:45692849-45692929 (+)
AKR/J ENSMUSG00220039028
 snoRNA gene Chr11:45898066-45898146 (+)
BALB/cJ ENSMUSG00180037287
 snoRNA gene Chr11:45682513-45682593 (+)
C3H/HeJ ENSMUSG00175041219
 snoRNA gene Chr11:45724605-45724685 (+)
C57BL/6NJ ENSMUSG00215036878
 snoRNA gene Chr11:45651466-45651546 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0035857
 snoRNA gene Chr11:43791552-43791632 (+)
CAST/EiJ ENSTCUG00005044437
 snoRNA gene Chr11:45424519-45424599 (+)
CBA/J ENSMUSG00210029732
 snoRNA gene Chr11:45580553-45580633 (+)
DBA/2J ENSMUSG00185029023
 snoRNA gene Chr11:45762846-45762926 (+)
FVB/NJ ENSMUSG00205037255
 snoRNA gene Chr11:45709702-45709782 (+)
JF1/MsJ ENSUMUG00000043876
 snoRNA gene Chr11:46042784-46042864 (+)
LP/J ENSMUSG00230034059
 snoRNA gene Chr11:46902070-46902150 (+)
NOD/ShiLtJ ENSMUSG00190043717
 snoRNA gene Chr11:45834852-45834932 (+)
NZO/HlLtJ ENSMUSG00225036087
 snoRNA gene Chr11:48882623-48882703 (+)
PWK/PhJ ENSLUMG00010035681
 snoRNA gene Chr11:45581854-45581934 (+)
SPRET/EiJ ENSMSPG00010020761
 snoRNA gene Chr11:46265244-46265324 (+)
WSB/EiJ ENSIUOG00005042602
 snoRNA gene Chr11:45613071-45613151 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    603
  • Tissues
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100216534 NCBI Gene Model | MGI Sequence Detail 77 C57BL/6J ±  kb
transcript NR_028563 RefSeq | MGI Sequence Detail 77 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
References
more
  • Summaries
    All 8
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:223207 Volta V, et al., RACK1 depletion in a mouse model causes lethality, pigmentation deficits and reduction in protein synthesis efficiency. Cell Mol Life Sci. 2013 Apr;70(8):1439-50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory