Mir1906-1 Gene Detail

Summary

• Symbol
  Mir1906-1
• Name
  microRNA 1906-1
• Synonyms
  Mir1906, Mirn1906, mmu-mir-1906-1

• Feature Type
  miRNA gene
• IDs
  MGI:3811417
  NCBI Gene: 100316809
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:109510424-109510503 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 60.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3811417	miRNA gene	Chr12:109510424-109510503 (+)
129S1/SvImJ	ENSMUSG00200027003	miRNA gene	Chr12:101284163-101284242 (+)
A/J	ENSMUSG00195047554	miRNA gene	Chr12:103815893-103815972 (+)
AKR/J	ENSMUSG00220043216	miRNA gene	Chr12:101698441-101698520 (+)
BALB/cJ	ENSMUSG00180048847	miRNA gene	Chr12:103047314-103047393 (+)
C3H/HeJ	ENSMUSG00175038708	miRNA gene	Chr12:105626400-105626479 (+)
C57BL/6NJ	ENSMUSG00215047013	miRNA gene	Chr12:102320257-102320336 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020066	miRNA gene	Chr12:101798630-101798709 (+)
CBA/J	ENSMUSG00210033163	miRNA gene	Chr12:102687854-102687933 (+)
DBA/2J	ENSMUSG00185029842	miRNA gene	Chr12:104506628-104506707 (+)
FVB/NJ	ENSMUSG00205035991	miRNA gene	Chr12:101732174-101732253 (+)
JF1/MsJ	ENSUMUG00000029910	miRNA gene	Chr12:109264059-109264138 (+)
LP/J	ENSMUSG00230031567	miRNA gene	Chr12:111549069-111549148 (+)
NOD/ShiLtJ	ENSMUSG00190036879	miRNA gene	Chr12:83491179-83491258 (-)
NZO/HlLtJ	ENSMUSG00225039378	miRNA gene	Chr12:113307943-113308022 (+)
PWK/PhJ	ENSLUMG00010045693	miRNA gene	Chr12:102736472-102736551 (+)
SPRET/EiJ	ENSMSPG00010022231	miRNA gene	Chr12:105019859-105019938 (+)
WSB/EiJ	ENSIUOG00005008957	miRNA gene	Chr12:101729642-101729721 (+)

Homology

• Gene Tree
  Mir1906-1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084535 (Evidence)
• NCBI Gene
  100316809

Representative Sequences			Length	Strain/Species
genomic	100316809	NCBI Gene Model | MGI Sequence Detail	80	C57BL/6J
transcript	NR_035440	RefSeq | MGI Sequence Detail	80	ZRU/MplStud

Other Database
Links

miRBase

MI0008321

References

• Summaries
  All 6
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4