Gm10087 Pseudogene Detail

Summary

• Symbol
  Gm10087
• Name
  predicted gene 10087

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3809877
  NCBI Gene: 102633269
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:110125999-110126328 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 57.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3809877	pseudogene	Chr7:110118457-110132352 (+)
129S1/SvImJ	ENSMUSG00200035010	pseudogene	Chr7:96668662-96668991 (+)
A/J	ENSMUSG00195054793	pseudogene	Chr7:101164589-101164918 (+)
AKR/J	ENSMUSG00220039381	pseudogene	Chr7:94568087-94568416 (+)
BALB/cJ	ENSMUSG00180046853	pseudogene	Chr7:97840199-97840528 (+)
C3H/HeJ	ENSMUSG00175051881	pseudogene	Chr7:98476099-98476428 (+)
C57BL/6NJ	ENSMUSG00215051587	pseudogene	Chr7:97780902-97781231 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009967	pseudogene	Chr14:61828910-61829256 (-)
CAST/EiJ	ENSTCUG00005044069	pseudogene	Chr7:101158761-101159090 (+)
CBA/J	ENSMUSG00210048565	pseudogene	Chr7:98303162-98303491 (+)
DBA/2J	ENSMUSG00185022150	pseudogene	Chr7:102653455-102653784 (+)
FVB/NJ	ENSMUSG00205049186	pseudogene	Chr7:98265517-98265846 (+)
JF1/MsJ	ENSUMUG00000052859	pseudogene	Chr7:107672775-107673104 (+)
LP/J	ENSMUSG00230049035	pseudogene	Chr7:108754427-108754756 (+)
NOD/ShiLtJ	ENSMUSG00190045933	pseudogene	Chr7:98466238-98466567 (+)
NZO/HlLtJ	ENSMUSG00225018852	pseudogene	Chr7:106972568-106972897 (+)
PWK/PhJ	ENSLUMG00010043181	pseudogene	Chr7:96803798-96804127 (+)
SPRET/EiJ	ENSMSPG00010043343	pseudogene	Chr7:97959882-97960211 (+)
WSB/EiJ	ENSIUOG00005050250	pseudogene	Chr7:99114767-99115096 (+)

Homology

• Gene Tree
  Gm10087
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10087
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000060777 (Evidence)
• NCBI Gene
  102633269

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000060777	Ensembl Gene Model | MGI Sequence Detail	330	C57BL/6J
transcript	ENSMUST00000167650	Ensembl | MGI Sequence Detail	330	Not Applicable

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67