Gm4207 Pseudogene Detail

Summary

• Symbol
  Gm4207
• Name
  predicted gene 4207

• Feature Type
  pseudogene
• IDs
  MGI:3809198
  NCBI Gene: 100043069
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:22505779-22506738 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 10.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3809198	pseudogene	Chr7:22505771-22507899 (-)
129S1/SvImJ	ENSMUSG00200045667	pseudogene	Chr7:13059944-13060902 (-)
A/J	ENSMUSG00195054104	pseudogene	Chr7:15042844-15043801 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175052684	pseudogene	Chr7:13942978-13943936 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210053299	pseudogene	Chr7:13169031-13169989 (-)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205052176	pseudogene	Chr7:13580821-13581779 (-)
JF1/MsJ	ENSUMUG00000057931	pseudogene	Chr7:20105080-20106042 (+)
JF1/MsJ	ENSUMUG00000045686	pseudogene	Chr7:19926443-19927401 (-)
JF1/MsJ	ENSUMUG00000057934	pseudogene	Chr7:20783806-20784761 (-)
LP/J	ENSMUSG00230054025	pseudogene	Chr7:20901614-20902572 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225026873	pseudogene	Chr7:20386797-20387756 (-)
PWK/PhJ	ENSLUMG00010051071	pseudogene	Chr7:2785056-2786014 (-)
SPRET/EiJ	ENSMSPG00010051852	pseudogene	Chr7:12872526-12873484 (-)
WSB/EiJ	ENSIUOG00005052483	pseudogene	Chr7:7547625-7548583 (-)

Homology

• Gene Tree
  Gm4207
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000100654 (Evidence)
• NCBI Gene
  100043069

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100654	Ensembl Gene Model | MGI Sequence Detail	960	C57BL/6J
transcript	ENSMUST00000173144	Ensembl | MGI Sequence Detail	960	Not Applicable
polypeptide	Q0VDV9	UniProt | EBI | MGI Sequence Detail	320	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• InterPro Domains
  IPR017452 GPCR, rhodopsin-like, 7TM
  IPR004072 Vomeronasal receptor, type 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;